Hi Tássia, On Sun, Feb 21, 2021 at 06:07:26AM -0800, Tassia Camoes Araujo wrote: > > thanks for having a look into prottest autopkgtest. Your research into > > the docs helped to write some sensible test. I took the freedom to > > enhance it a bit. > > > Great, thanks!
You are welcome. > > Now the test is passing. However, I'm stumbling upon the lines > > > > Model optimization exception: there was an error while executing > > there was an error parsing PhyML stats file: Stats file does not > > exist. Please check if PhyML is working. > > > Yes, I saw that yesterday, and I found the following related bug report: > https://github.com/ddarriba/prottest3/issues/12 Argh. Boils down to "use a very outdated version of some standard tool if I'm reading correctly. Could someone please comment on this? I have no idea what effect this might have on the final result of prottest since the test seems to pass otherwise. > > PS: Tássia, I also uploaded the changelog to make the entry featuring > > the autopkgtest yours. Please verify that this is the e-mail > > address that should show up for you. > > > The changelog on git is still the old one, no? > https://salsa.debian.org/med-team/prottest/-/blob/master/debian/changelog > But you can use my [email protected] Ahhh, I simply forgot to push. I've set now this e-mail and pushed. Thanks again for your work on this. I'll probably upload with Pierres enhancement and drop a hint to upstream issue #12. Kind regards Andreas. -- http://fam-tille.de
