Hi again in this iterative build process, ;-)
Am Tue, Feb 01, 2022 at 10:10:56AM +0100 schrieb Mathieu Malaterre:
> >
> > Thanks to your patch I was able to make some progress and added
> > further patches. Now I'm struck again since the build system injects
> > some `-static` option. I checked
>
> I can see your patch `no_static_linking.patch` which seems to be
> missing the PORTABLE option. This one needs to be set to "OFF"
This is done now[1] ... but this build issue is not done yet:
...
[100%] Linking CXX executable sortmerna
cd /build/sortmerna-4.3.4/obj-x86_64-linux-gnu/src/sortmerna && /usr/bin/cmake
-E cmake_link_script CMakeFiles/sortmerna.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/sortmerna-4.3.4=.
-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
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-L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib
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/usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o
/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o
GNU ld (GNU Binutils for Debian) 2.37.90.20220130
/usr/bin/ld: CMakeFiles/smr_objs.dir/output.cpp.o: undefined reference to
symbol 'pthread_create@@GLIBC_2.2.5'
/usr/bin/ld: /lib/x86_64-linux-gnu/libpthread.so.0: error adding symbols: DSO
missing from command line
collect2: error: ld returned 1 exit status
Any further hint?
Kind regards and thanks a lot for your patience
Andreas.
[1]
https://salsa.debian.org/med-team/sortmerna/-/blob/master/debian/patches/no_static_linking.patch
--
http://fam-tille.de
