Hi Andreas, I second that - the tests run fine if I do:
cd python-biom-format-1.2.0/python-code env PYTHONPATH=../build/lib.linux-x86_64-2.7/biom nosetests Also, if I have python-biom-format installed then the commands work fine and I can do: cd ~ ; python -c 'import biom.sparsemat' But within the python-code directory the above command fails, as it picks up the local biom/sparsemat.py module but is missing _sparsemat.so. Or is that not working on Sid? Cheers, TIM On Tue, 2013-11-12 at 10:32 +0000, PICCA Frederic-Emmanuel wrote: > Hell andreas > > for numexpr we are doing like this. > you need to set the PYTHONPATh in order to find the extension > > > override_dh_auto_test: > ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) > > set -e -x;\ > for py in $(PY2VERS) $(PY3VERS); do \ > cd $(CURDIR)/build/lib.*-$$py;\ > env PYTHONPATH=. python$$py numexpr/tests/test_numexpr.py;\ > cd $(CURDIR)/build/lib.*-$$py-pydebug;\ > env PYTHONPATH=. python$$py-dbg > numexpr/tests/test_numexpr.py;\ > done > > endif > > > cheers > > Fred -- Tim Booth <[email protected]> NERC Environmental Bioinformatics Centre Centre for Ecology and Hydrology Maclean Bldg, Benson Lane Crowmarsh Gifford Wallingford, England OX10 8BB http://nebc.nerc.ac.uk +44 1491 69 2705 -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected] Archive: http://lists.debian.org/1384259397.1539.35.camel@balisaur
