Just FYI - there's a Python module called Jellyfish about to be uploaded; can we resolve the name collision early?
https://pypi.python.org/pypi/jellyfish Paul On Tue, Dec 29, 2015 at 12:06 PM, Scott Kitterman <deb...@kitterman.com> wrote: > On Tuesday, December 29, 2015 11:52:07 AM Scott Kitterman wrote: > > On Tuesday, December 29, 2015 12:30:14 AM Andreas Tille wrote: > > > Hi, > > > > > > I realised that for jellyfish[1] Python bindings can be activated. I > > > tried to do so and configuring and building works fine - but I have no > > > idea how to sensibly install the files into the python-jellyfish > > > package. Any idea how to call swig/python/setup.py or do something > else > > > to install the files into the right location. > > > > > > Any help? > > > > > > Kind regards > > > > > > Andreas. > > > > > > [1] git://anonscm.debian.org/debian-med/jellyfish.git > > > > I haven't been able to actually test this since when I try to build it, I > > get this error: > > > > jellyfish_wrap.cxx:3104:33: fatal error: jellyfish/mer_dna.hpp: No such > file > > or directory > > > > I think it should ~work. Note that these bindings are for python3, not > > python. I've adjusted things accordingly. The configure changes I made > (so > > that configure wouldn't fail) mean perl bindings don't get built > either. I > > didn't check if that was working before. > > > > Scott K > > Correction: It's not in the diff, but I had to remove the auto-configure > override to get through configure. > > Scott K > > -- All programmers are playwrights, and all computers are lousy actors. #define sizeof(x) rand() :wq
