Your message dated Mon, 11 Mar 2019 19:44:02 +0000
with message-id <[email protected]>
and subject line unblock libbpp-seq
has caused the Debian Bug report #923965,
regarding unblock: libbpp-seq/2.4.1-3
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
923965: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=923965
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: release.debian.org
Severity: normal
User: [email protected]
Usertags: unblock
Please unblock package libbpp-seq
libbpp-seq (2.4.1-3) unstable; urgency=medium
.
* Rebuild for new version of gcc to fix symbols
Closes: #923954
* Standards-Version: 4.3.0
unblock libbpp-seq/2.4.1-3
-- System Information:
Debian Release: 9.6
APT prefers stable-updates
APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)
Kernel: Linux 4.9.0-6-amd64 (SMP w/1 CPU core)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8),
LANGUAGE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
diff -Nru libbpp-seq-2.4.1/debian/changelog libbpp-seq-2.4.1/debian/changelog
--- libbpp-seq-2.4.1/debian/changelog 2018-12-03 08:15:45.000000000 +0100
+++ libbpp-seq-2.4.1/debian/changelog 2019-03-07 18:56:16.000000000 +0100
@@ -1,3 +1,11 @@
+libbpp-seq (2.4.1-3) unstable; urgency=medium
+
+ * Rebuild for new version of gcc to fix symbols
+ Closes: #923954
+ * Standards-Version: 4.3.0
+
+ -- Andreas Tille <[email protected]> Thu, 07 Mar 2019 18:56:16 +0100
+
libbpp-seq (2.4.1-2) unstable; urgency=medium
[ Jelmer Vernooij ]
diff -Nru libbpp-seq-2.4.1/debian/control libbpp-seq-2.4.1/debian/control
--- libbpp-seq-2.4.1/debian/control 2018-12-03 08:15:45.000000000 +0100
+++ libbpp-seq-2.4.1/debian/control 2019-03-07 18:56:16.000000000 +0100
@@ -8,7 +8,7 @@
cmake,
d-shlibs (>= 0.80),
libbpp-core-dev (>= 2.4.1)
-Standards-Version: 4.2.1
+Standards-Version: 4.3.0
Vcs-Browser: https://salsa.debian.org/med-team/libbpp-seq
Vcs-Git: https://salsa.debian.org/med-team/libbpp-seq.git
Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
diff -Nru libbpp-seq-2.4.1/debian/libbpp-seq12.symbols
libbpp-seq-2.4.1/debian/libbpp-seq12.symbols
--- libbpp-seq-2.4.1/debian/libbpp-seq12.symbols 2018-12-03
08:15:45.000000000 +0100
+++ libbpp-seq-2.4.1/debian/libbpp-seq12.symbols 2019-03-07
18:56:16.000000000 +0100
@@ -328,7 +328,6 @@
_ZN3bpp16AbstractAlphabet8getStateERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
_ZN3bpp16AbstractAlphabet8getStateEi@Base 2.4.1
_ZN3bpp16AbstractAlphabet8setStateEmPNS_13AlphabetStateE@Base 2.4.1
- _ZN3bpp16AbstractAlphabetC2ERKS0_@Base 2.4.1
_ZN3bpp16AbstractAlphabetD2Ev@Base 2.4.1
_ZN3bpp16AbstractCoreSite11setPositionEi@Base 2.4.1
_ZN3bpp16ApplicationTools12getParameterIjEET_RKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKSt3mapIS8_S8_St4lessIS8_ESaISt4pairIS9_S8_EEES2_SA_bi@Base
2.4.1
@@ -1710,13 +1709,13 @@
_ZNKSt5ctypeIcE8do_widenEc@Base 2.4.1
_ZNKSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE4findERS7_@Base
2.4.1
_ZNKSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE4findERS7_@Base
2.4.1
+
_ZNSt11_Deque_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base
2.4.1
+
_ZNSt11_Deque_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base
2.4.1
_ZNSt11_Deque_baseIiSaIiEE17_M_initialize_mapEm@Base 2.4.1
_ZNSt11_Deque_baseIiSaIiEED1Ev@Base 2.4.1
_ZNSt11_Deque_baseIiSaIiEED2Ev@Base 2.4.1
_ZNSt13_Bvector_baseISaIbEE13_M_deallocateEv@Base 2.4.1
_ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St4lessIS5_ESaISt4pairIKS5_S5_EEEixEOS5_@Base
2.4.1
-
_ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St4lessIS5_ESaISt4pairIKS5_S5_EEEixERS9_@Base
2.4.1
-
_ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorImSaImEESt4lessIS5_ESaISt4pairIKS5_S8_EEEixERSC_@Base
2.4.1
_ZNSt3mapIiiSt4lessIiESaISt4pairIKiiEEEixEOi@Base 2.4.1
_ZNSt5dequeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base
2.4.1
_ZNSt5dequeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base
2.4.1
@@ -1813,7 +1812,6 @@
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE11equal_rangeERS7_@Base
2.4.1
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE12_M_erase_auxESt23_Rb_tree_const_iteratorISB_E@Base
2.4.1
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSJ_PSt13_Rb_tree_nodeISB_E@Base
2.4.1
-
(optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE16_M_insert_uniqueIS6_IS5_SA_EEES6_ISt17_Rb_tree_iteratorISB_EbEOT_@Base
2.4.1
(optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE17_M_emplace_uniqueIJS6_IS5_SA_EEEES6_ISt17_Rb_tree_iteratorISB_EbEDpOT_@Base
2.4.1
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS7_EESM_IJEEEEESt17_Rb_tree_iteratorISB_ESt23_Rb_tree_const_iteratorISB_EDpOT_@Base
2.4.1
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8SequenceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
@@ -1851,6 +1849,7 @@
_ZNSt8_Rb_treeIcSt4pairIKcdESt10_Select1stIS2_ESt4lessIcESaIS2_EE24_M_get_insert_unique_posERS1_@Base
2.4.1
_ZNSt8_Rb_treeIcSt4pairIKcdESt10_Select1stIS2_ESt4lessIcESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base
2.4.1
_ZNSt8_Rb_treeIcSt4pairIKcdESt10_Select1stIS2_ESt4lessIcESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base
2.4.1
+
_ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base
2.4.1
_ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE24_M_get_insert_unique_posERS1_@Base
2.4.1
_ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base
2.4.1
_ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE7_M_copyINS8_11_Alloc_nodeEEEPSt13_Rb_tree_nodeIS2_EPKSC_PSt18_Rb_tree_node_baseRT_@Base
2.4.1
@@ -1873,6 +1872,7 @@
_ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE7_M_copyINS8_11_Alloc_nodeEEEPSt13_Rb_tree_nodeIS2_EPKSC_PSt18_Rb_tree_node_baseRT_@Base
2.4.1
_ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base
2.4.1
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSA_PSt13_Rb_tree_nodeIS2_E@Base
2.4.1
+
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJOiEESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base
2.4.1
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base
2.4.1
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_@Base
2.4.1
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base
2.4.1
@@ -1884,10 +1884,10 @@
_ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS5_ERS1_@Base
2.4.1
_ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE8_M_eraseEPSt13_Rb_tree_nodeIS5_E@Base
2.4.1
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSA_PSt13_Rb_tree_nodeIS2_E@Base
2.4.1
+
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJOmEESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base
2.4.1
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE24_M_get_insert_unique_posERS1_@Base
2.4.1
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base
2.4.1
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base
2.4.1
-
_ZSt11__remove_ifIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEENS0_5__ops16_Iter_equals_valIKiEEET_SB_SB_T0_@Base
2.4.1
_ZSt13__adjust_heapIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEElS5_NS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_T0_SH_T1_T2_@Base
2.4.1
_ZSt16__insertion_sortIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEENS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_SG_T0_@Base
2.4.1
_ZSt16__introsort_loopIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEElNS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_SG_T0_T1_@Base
2.4.1
@@ -2460,7 +2460,6 @@
_ZTVN3bpp7ClustalE@Base 2.4.1
_ZTVN3bpp7GenBankE@Base 2.4.1
_ZTVN3bpp8BLOSUM50E@Base 2.4.1
- _ZTVN3bpp8ClonableE@Base 2.4.1
_ZTVN3bpp8DNAToRNAE@Base 2.4.1
_ZTVN3bpp8PhredPhdE@Base 2.4.1
_ZTVN3bpp9PhredPolyE@Base 2.4.1
--- End Message ---
--- Begin Message ---
Unblocked libbpp-seq.
--- End Message ---
