Package: release.debian.org Severity: normal User: [email protected] Usertags: unblock
Dear release team, please unblock package augustus. The only change I have made in the current version in unstable is making sure that no hardcoded value for Built-Using is used any more, calculating it from the version used at build time instead. I have also corrected the name of the respective package referenced by this Built-Using. Please find attached a debdiff with my changes. unblock augustus/3.3.2+dfsg-2 Many thanks Sascha
diff -Nru augustus-3.3.2+dfsg/debian/changelog augustus-3.3.2+dfsg/debian/changelog --- augustus-3.3.2+dfsg/debian/changelog 2018-10-06 14:24:12.000000000 +0200 +++ augustus-3.3.2+dfsg/debian/changelog 2019-03-15 17:11:10.000000000 +0100 @@ -1,3 +1,10 @@ +augustus (3.3.2+dfsg-2) unstable; urgency=medium + + * Use dynamic Built-Using in d/control. + Closes: #924359 + + -- Sascha Steinbiss <[email protected]> Fri, 15 Mar 2019 17:11:10 +0100 + augustus (3.3.2+dfsg-1) unstable; urgency=medium * New upstream release. diff -Nru augustus-3.3.2+dfsg/debian/control augustus-3.3.2+dfsg/debian/control --- augustus-3.3.2+dfsg/debian/control 2018-10-06 14:24:12.000000000 +0200 +++ augustus-3.3.2+dfsg/debian/control 2019-03-13 16:48:17.000000000 +0100 @@ -28,7 +28,7 @@ Depends: ${shlibs:Depends}, ${misc:Depends}, augustus-data -Built-Using: samtools-legacy (= 0.1.19-2) +Built-Using: libbam-dev (= ${libbam-dev:Version}) Description: gene prediction in eukaryotic genomes AUGUSTUS is a software for gene prediction in eukaryotic genomic sequences that is based on a generalized hidden Markov model (HMM), a probabilistic diff -Nru augustus-3.3.2+dfsg/debian/rules augustus-3.3.2+dfsg/debian/rules --- augustus-3.3.2+dfsg/debian/rules 2018-10-06 14:24:12.000000000 +0200 +++ augustus-3.3.2+dfsg/debian/rules 2019-03-13 17:04:28.000000000 +0100 @@ -3,6 +3,7 @@ export DEB_BUILD_MAINT_OPTIONS = hardening=+all export TOOLDIR = /usr/include export AUGUSTUS_CONFIG_PATH=$(CURDIR)/config +export LIBBAM_PKG_VERSION=$(shell apt-cache policy libbam-dev | grep Installed | cut -f2 -d: | cut -c2-) .PHONY: bam2hints homGeneMapping checkTargetSortedness joingenes %: @@ -45,6 +46,7 @@ $(MAKE) -C auxprogs/compileSpliceCands clean $(MAKE) -C auxprogs/filterBam clean rm -rf bin + rm -f debian/*substvars override_dh_auto_build: aln2wig bam2hints bam2wig checkTargetSortedness compileSpliceCands filterBam homGeneMapping joingenes dh_auto_build @@ -85,3 +87,7 @@ override_dh_compress: dh_compress -Xtutorial + +override_dh_gencontrol: + echo "libbam-dev:Version=$(LIBBAM_PKG_VERSION)" >> debian/augustus.substvars + dh_gencontrol
