Your message dated Mon, 10 Aug 2020 07:48:33 +0000
with message-id <e1k52xp-000el9...@fasolo.debian.org>
and subject line Bug#966712: fixed in statsmodels 0.11.1-4
has caused the Debian Bug report #966712,
regarding statsmodels: debci tests fail
to be marked as done.
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--
966712: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=966712
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: statsmodels
Severity: normal
Three statsmodels debci tests (autopkgtest) are failing against
scipy 1.5.2:
../../../../usr/lib/python3/dist-packages/statsmodels/base/tests/test_optimize.py::test_full_output_false
FAILED [ 1%]
../../../../usr/lib/python3/dist-packages/statsmodels/base/tests/test_optimize.py::test_full_output
FAILED [ 1%]
../../../../usr/lib/python3/dist-packages/statsmodels/regression/tests/test_rolling.py::test_plot
FAILED [ 30%]
Error traces:
=================================== FAILURES ===================================
____________________________ test_full_output_false ____________________________
reset_randomstate = None
@pytest.mark.smoke
def test_full_output_false(reset_randomstate):
# newton needs f, score, start, fargs, kwargs
# bfgs needs f, score start, fargs, kwargs
# nm needs ""
# cg ""
# ncg ""
# powell ""
for method in fit_funcs:
func = fit_funcs[method]
if method == "newton":
xopt, retvals = func(dummy_func, dummy_score, [1], (), {},
hess=dummy_hess, full_output=False, disp=0)
else:
xopt, retvals = func(dummy_func, dummy_score, [1], (), {},
full_output=False, disp=0)
assert_(retvals is None)
if method == "powell":
#NOTE: I think I reported this? Might be version/optimize API
# dependent
> assert_(xopt.shape == () and xopt.size == 1)
E AssertionError
/usr/lib/python3/dist-packages/statsmodels/base/tests/test_optimize.py:53:
AssertionError
_______________________________ test_full_output _______________________________
reset_randomstate = None
def test_full_output(reset_randomstate):
for method in fit_funcs:
func = fit_funcs[method]
if method == "newton":
xopt, retvals = func(dummy_func, dummy_score, [1], (), {},
hess=dummy_hess, full_output=True, disp=0)
else:
xopt, retvals = func(dummy_func, dummy_score, [1], (), {},
full_output=True, disp=0)
assert_(retvals is not None)
assert_('converged' in retvals)
if method == "powell":
#NOTE: I think I reported this? Might be version/optimize API
# dependent
> assert_(xopt.shape == () and xopt.size == 1)
E AssertionError
/usr/lib/python3/dist-packages/statsmodels/base/tests/test_optimize.py:75:
AssertionError
__________________________________ test_plot ___________________________________
@pytest.mark.matplotlib
def test_plot():
import matplotlib.pyplot as plt
y, x, w = gen_data(250, 3, True, pandas=True)
fmla = 'y ~ 1 + x0 + x1 + x2'
data = pd.concat([y, x], axis=1)
mod = RollingWLS.from_formula(fmla, window=100, data=data, weights=w)
res = mod.fit()
fig = res.plot_recursive_coefficient()
assert isinstance(fig, plt.Figure)
res.plot_recursive_coefficient(variables=2, alpha=None,
figsize=(30, 7))
res.plot_recursive_coefficient(variables='x0', alpha=None,
figsize=(30, 7))
res.plot_recursive_coefficient(variables=[0, 2], alpha=None,
figsize=(30, 7))
res.plot_recursive_coefficient(variables=['x0'], alpha=None,
figsize=(30, 7))
res.plot_recursive_coefficient(variables=['x0', 'x1', 'x2'], alpha=None,
figsize=(30, 7))
with pytest.raises(ValueError, match='variable x4 is not an integer'):
res.plot_recursive_coefficient(variables='x4')
fig = plt.Figure()
with pytest.warns(UserWarning, match="tight_layout"):
> out = res.plot_recursive_coefficient(fig=fig)
E Failed: DID NOT WARN. No warnings of type (<class 'UserWarning'>,)
matching ('tight_layout') was emitted. The list of emitted warnings is:
[MatplotlibDeprecationWarning('savefig() got unexpected keyword argument "dpi"
which is no longer supported as of 3.3 and will become an error two minor
releases later')].
/usr/lib/python3/dist-packages/statsmodels/regression/tests/test_rolling.py:260:
Failed
-- System Information:
Debian Release: bullseye/sid
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 5.7.0-2-amd64 (SMP w/8 CPU threads)
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8),
LANGUAGE=en_AU:en
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
--- End Message ---
--- Begin Message ---
Source: statsmodels
Source-Version: 0.11.1-4
Done: rebecca_pal...@zoho.com (Rebecca N. Palmer)
We believe that the bug you reported is fixed in the latest version of
statsmodels, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 966...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Rebecca N. Palmer <rebecca_pal...@zoho.com> (supplier of updated statsmodels
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 09 Aug 2020 22:12:11 +0100
Source: statsmodels
Architecture: source
Version: 0.11.1-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Rebecca N. Palmer <rebecca_pal...@zoho.com>
Closes: 966712
Changes:
statsmodels (0.11.1-4) unstable; urgency=medium
.
* Tests: ignore changes due to matplotlib 3.3 and scipy 1.5.
Closes: #966712.
* Bump debhelper compat to 13.
* Override Lintian warning from test references.
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--- End Message ---
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