Your message dated Sat, 19 Mar 2022 13:03:56 +0000 with message-id <[email protected]> and subject line Bug#1007930: fixed in dune-common 2.8.0-4 has caused the Debian Bug report #1007930, regarding libdune-common-dev: METIS_PartGraphVKway is available in metis v3 but DUNE modules test to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 1007930: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1007930 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: libdune-common-dev Version: 2.8.0-3 Severity: important Tags: upstream Control: block 1007830 by -1 Dear Maintainer, If a user creates a DUNE module with the duneproject script on Debian sid with the package libscotchmetis-dev install, then running CMake will fail in this module: -- Found PTScotch: /usr/lib/x86_64-linux-gnu/libscotch.so (found version "7.0.1") -- Looking for METIS_PartGraphVKway CMake Error: The following variables are used in this project, but they are set to NOTFOUND. Please set them or make sure they are set and tested correctly in the CMake files: METIS_LIBRARY linked by target "cmTC_6a2ff" in directory /home/opm- build/test/tester/build/CMakeFiles/CMakeTmp CMake Error at /usr/share/cmake-3.22/Modules/CheckSymbolExists.cmake:148 (try_compile): Failed to generate test project build system. Call Stack (most recent call first): /usr/share/cmake-3.22/Modules/CheckSymbolExists.cmake:71 (__CHECK_SYMBOL_EXISTS_IMPL) /usr/share/dune/cmake/modules/FindMETIS.cmake:131 (check_symbol_exists) /usr/share/dune/cmake/modules/DuneCommonMacros.cmake:35 (find_package) /usr/share/dune/cmake/modules/DuneMacros.cmake:609 (include) /usr/share/dune/cmake/modules/DuneMacros.cmake:699 (dune_process_dependency_macros) CMakeLists.txt:19 (dune_project) -- Configuring incomplete, errors occurred! See also "/home/opm-build/test/tester/build/CMakeFiles/CMakeOutput.log". See also "/home/opm-build/test/tester/build/CMakeFiles/CMakeError.log". According to bug #1007830 this is because METIS_PartGraphVKway is in metis v3 but the default version used in v5. Therefore we might need to change /usr/share/dune/cmake/module/FindMetis.cmake such that it uses libmetisv3.so. Explanation copied from #1007830: scotch 7.0.1 has just been uploaded to unstable. It provides some metis (and parmetis) compatibility which opm-grid is using. The scotch metis compatibility version can be selected via metis.h with define variable SCOTCH_METIS_VERSION. If not set then SCOTCH_METIS_VERSION=5 is applied, i.e. metis v5. >From scotch v7, compatibility libraries are provided for both metis v3 and v5 (libscotchmetisv3.so, libscotchmetisv5.so). For default metis -- System Information: Debian Release: bookworm/sid APT prefers unstable APT policy: (500, 'unstable') Architecture: amd64 (x86_64) Kernel: Linux 5.10.0-12-amd64 (SMP w/32 CPU threads) Locale: LANG=C, LC_CTYPE=C (charmap=ANSI_X3.4-1968) (ignored: LC_ALL set to C), LANGUAGE not set Shell: /bin/sh linked to /bin/dash Init: unable to detect Versions of packages libdune-common-dev depends on: ii cmake 3.22.1-1+b1 ii gfortran 4:11.2.0-2 ii libatlas-base-dev 3.10.3-12 ii libatlas3-base [liblapack.so.3] 3.10.3-12 ii libc6 2.33-7 ii libgcc-s1 12-20220313-1 ii liblapack-dev 3.10.0-2 ii liblapack3 [liblapack.so.3] 3.10.0-2 ii libstdc++6 12-20220313-1 ii mpi-default-bin 1.14 ii mpi-default-dev 1.14 ii pkg-config 0.29.2-1 Versions of packages libdune-common-dev recommends: ii python3 3.9.8-1 Versions of packages libdune-common-dev suggests: pn libdune-common-doc <none>
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--- Begin Message ---Source: dune-common Source-Version: 2.8.0-4 Done: Drew Parsons <[email protected]> We believe that the bug you reported is fixed in the latest version of dune-common, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Drew Parsons <[email protected]> (supplier of updated dune-common package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Sat, 19 Mar 2022 13:10:34 +0100 Source: dune-common Architecture: source Version: 2.8.0-4 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers <[email protected]> Changed-By: Drew Parsons <[email protected]> Closes: 1007823 1007830 1007930 Changes: dune-common (2.8.0-4) unstable; urgency=medium . * Team upload. . [ Markus Blatt ] * FindMETIS.cmake: Also search for libscotchmetisv5 and libscotchmetisv3 (Closes: #1007823, #1007830, #1007930) . [ Drew Parsons ] * apply FindMETis.cmake patch in debian patch findmetis_scotch7.patch Checksums-Sha1: 891995cda52a80eeeda81c3651b8cd0a94ec676a 2668 dune-common_2.8.0-4.dsc c29706096aabd71ee68f9fc0817678893a7bfaf5 11936 dune-common_2.8.0-4.debian.tar.xz Checksums-Sha256: 666c4fedb073366e154a6e170b26c0a776c950edcc0c3f107a7f2b23f9913ed1 2668 dune-common_2.8.0-4.dsc 212eff509ca4e42cc27ada01295d943d11ab09d565abe12e6af94f9be39d940e 11936 dune-common_2.8.0-4.debian.tar.xz Files: 3440dce1ebea31d964fb0fe88f6b3660 2668 libs optional dune-common_2.8.0-4.dsc 2a85583a97532da1c186a7d90557f884 11936 libs optional dune-common_2.8.0-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmI10DcACgkQVz7x5L1a Afp7ZBAAnt2lDTqd9vFf1lU4ceP2u5ZcQbtWTIHh8aQlIJjryB0ghBblE3vBIQRS 2ccuy0LIAEnxDT4tVi9eJX+57hRH3VYU7g55YJN/C1ni5aJ55b5MwJCiEx6irHtc bMduyMmb6HGLA+omcRxrgnloetMMQ3jw1K30HHULvYrJXrcHroAvisGaxPhyDfTe MoaHujXuIgo/rCCF7zjciRJDs1V3WQ/wIk3/aA5C91RAoybCwzqCxI8pj5AbMH9s 78yY4CHSPDB1ZzKlLDOvTb/BRrn2JIDrMOgWUHXGJHCO1FZPgWy3W6z4buicHqHP I8Ky8PGez17AUj0CZNddYzRTmUgwQALv3lF8ir+eFOrbxh+1BcSpu4rHrSDjixcN EejNt2yIf6aFDdCAmkU/Y8podd/WNzTCy0kGnqBVyzYyEKu5jxXoqVBb+JOV83SO H7eDCEzje9rN5nNbq9K+ydjni/ZSN5Y7ic31+PvTJcAxvnUby/kAcDRqIbFNPd96 Ek/uHIv52+pE8ZmfbkQqm1emE0N1CTmGK5OeKnthQq/wtLiiL5VXbvMLaS3JerTX ymKri9atQfM4TlT1JVmT6BYt8/gYgvlOB9/mSrYkV8r8hTvGvrYgnN3y9t1Olgjf xzPk5kNV4k9+++KrlcmFL4ToG/k744YoL/U3ZBSZlV6/S97Nsyg= =n6FL -----END PGP SIGNATURE-----
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