Your message dated Thu, 28 Sep 2023 15:54:12 +0000
with message-id <[email protected]>
and subject line Bug#1045045: fixed in h5py 3.9.0-1
has caused the Debian Bug report #1045045,
regarding h5py: Fails to build source after successful build
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1045045: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1045045
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: h5py
Version: 3.7.0-8
Severity: minor
Tags: trixie sid ftbfs
User: [email protected]
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: [email protected]
Usertags: qa-doublebuild
Hi,
This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).
This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.
More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild
Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env
> -us -uc -rfakeroot -S
> ---------------------------------------------------------------------------------------------------------------
>
> dpkg-buildpackage: info: source package h5py
> dpkg-buildpackage: info: source version 3.7.0-8
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Drew Parsons <[email protected]>
> dpkg-source --before-build .
> dpkg-source: info: using options from h5py-3.7.0/debian/source/options:
> --extend-diff-ignore=^[^/]+\.egg-info/
> fakeroot debian/rules clean
> dh clean --buildsystem=pybuild
> debian/rules override_dh_auto_clean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_auto_clean -D build-h5py_serial || /bin/true
> dh_auto_clean -D build-h5py_mpi || /bin/true
> rm -Rf docs/_build docs_api/_build
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_autoreconf_clean -O--buildsystem=pybuild
> debian/rules override_dh_clean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_clean
> rm -rf build-h5py_serial build-h5py_mpi
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dpkg-source -b .
> dpkg-source: info: using options from h5py-3.7.0/debian/source/options:
> --extend-diff-ignore=^[^/]+\.egg-info/
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building h5py using existing ./h5py_3.7.0.orig.tar.gz
> dpkg-source: info: using patch list from debian/patches/series
> dpkg-source: warning: ignoring deletion of directory h5py.egg-info
> dpkg-source: warning: file h5py-3.7.0/.pytest_cache/v/cache/nodeids has no
> final newline (either original or modified version)
> dpkg-source: warning: file h5py-3.7.0/.pytest_cache/v/cache/stepwise has no
> final newline (either original or modified version)
> dpkg-source: info: local changes detected, the modified files are:
> h5py-3.7.0/.pytest_cache/CACHEDIR.TAG
> h5py-3.7.0/.pytest_cache/README.md
> h5py-3.7.0/.pytest_cache/v/cache/nodeids
> h5py-3.7.0/.pytest_cache/v/cache/stepwise
> dpkg-source: error: aborting due to unexpected upstream changes, see
> /tmp/h5py_3.7.0-8.diff.5gS4A0
> dpkg-source: info: Hint: make sure the version in debian/changelog matches
> the unpacked source tree
> dpkg-source: info: you can integrate the local changes with dpkg-source
> --commit
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2
>
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage
> --sanitize-env -us -uc -rfakeroot -S' failed to run.
The full build log is available from:
http://qa-logs.debian.net/2023/08/13/h5py_3.7.0-8_unstable.log
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: h5py
Source-Version: 3.9.0-1
Done: Drew Parsons <[email protected]>
We believe that the bug you reported is fixed in the latest version of
h5py, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <[email protected]> (supplier of updated h5py package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 28 Sep 2023 17:00:27 +0200
Source: h5py
Architecture: source
Version: 3.9.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Drew Parsons <[email protected]>
Closes: 1032586 1041480 1045045 1051781
Changes:
h5py (3.9.0-1) unstable; urgency=medium
.
* Team upload.
.
[ Drew Parsons ]
* New upstream release.
- applies debian patch doc_extlink_PR2112.patch
- versioned Build-Depends: python3-mpi4py (>= 3.1.4)
* skip network (ros3) tests
- debian/tests: add *-network tests with ros3
using needs-internet
- drop debian patch skip_ros_test_no_net.patch
- see upstream Issue #2286 for further discussion of problems with
the --no-network option that should instead be used
* update debian/rules to patch python packages in pyproject.toml not
setup.py for each flavour (serial,mpi)
* update debian patch skip_test_selection_assertion.patch to
handle the test of FancySelection by tuple.
- use sel.FancySelection.__name__ rather than a hardcoded string
* debian/tests: run tests via exit() to catch error conditions
* create h5py-*.dist-info separately for serial and mpi builds, and
provide generic h5py dist-info in python3-h5py. Provide top-level
__init__.py wrapper in python3-h5py. Closes: #1041480, #1051781.
python-h5py Replaces, Breaks: python3-h5py-serial (<< 3.9.0-1~)
* dh_clean removes .pytest_cache. Closes: #1045045.
.
[ Enrico Zini ]
* hdf5-plugin-lzf: added provides and autopkgtests after
https://salsa.debian.org/science-team/h5f-packaging-guidelines
Closes: #1032586
Checksums-Sha1:
dc90cd07b8a42e6b646267e35639a17818fa3099 2872 h5py_3.9.0-1.dsc
208bbfe8a19387fd4b32d7dbeab944f9d6f1e7b1 402856 h5py_3.9.0.orig.tar.gz
d25b659dc0ef7e4e07290f938f552ec0ea01386b 20264 h5py_3.9.0-1.debian.tar.xz
Checksums-Sha256:
b9aee57747f7590b5fd9dbf697648324b10fb8b985aa8553ddd05b1801ded188 2872
h5py_3.9.0-1.dsc
e604db6521c1e367c6bd7fad239c847f53cc46646f2d2651372d05ae5e95f817 402856
h5py_3.9.0.orig.tar.gz
136d7ebb3cb8e3e0314b0afacea91ab64795fc759d9464bd9be1246e8bc6a4e1 20264
h5py_3.9.0-1.debian.tar.xz
Files:
8d01efb2e56aaf84bc638ec7b2d2a19f 2872 python optional h5py_3.9.0-1.dsc
138d72aa1324c28a37842bc99467dfba 402856 python optional h5py_3.9.0.orig.tar.gz
80c465683ad588fa55dabd39de78f7fc 20264 python optional
h5py_3.9.0-1.debian.tar.xz
-----BEGIN PGP SIGNATURE-----
iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmUVnQgACgkQVz7x5L1a
AfpovxAApKMef6nD5RqjV+Osfy+0xEoeTdc+q5yj0RW5no36tQH6Jzc8qT37+Xj0
GbklbUEhXb+B5zF8Fo1jpBIet2zhlejeIzps5lrAfqkfxeLx6wM1RLigM+rsi9GX
vjKvwVEqs/e7ptCSAV5GkYEIP8/l3V0XrlYGZ6/OFhJs/mUo0l3ie3EjfNuZ82Db
Sl9mKSh+tS/Y1nGRF7pNijORYaQVyzNgppf82c4I7y6OyAKrboo+SKKyND8UnlvG
VdKjsMuDfXNtpcz8yP4pFpFQYyJZtyen3CKfyViJWIrLbs/yCc46pfTzPDh27Ovv
GdOLpmXTp5R969qJMlAygxXr937DdwcUawTuP2qrlZa8Amxis8bDs7TDei/M/f+k
FPQB87NcYUWuO4RD+VObJ26eACbp5oTue/uuofvBNlgBtBDWKDDUSPPjCfOLoH9p
R/Nu4ppJTpZWO65vUKKr/kSwzLAh2v2AACD9jIsAEAVd8P3DrE0lFQXORdJy/5UN
mWaknIy2J9NFaimaIu+4AaT7tpcBIbmbDUMUi5I9NiOVbMq9htv2Piunwv9tTR8e
42Yg4y63sSDxeaUuOTdD44VQJb7WL9tqshal63fCD1LPa32tiD2Vc3jt0vnABACF
hpXzmdfswwH/rzamsDSXSuyjbZxYDCXM9JSkRh9g/p728ovCN5g=
=MTl5
-----END PGP SIGNATURE-----
--- End Message ---
--
debian-science-maintainers mailing list
[email protected]
https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
