Your message dated Sun, 19 May 2024 20:37:21 +0000
with message-id <[email protected]>
and subject line Bug#1065270: fixed in paraview 5.11.2+dfsg-7
has caused the Debian Bug report #1065270,
regarding Unable to open VTK file with appended data that were fine with
previous versions (invalid token in vtkXMLDataParser)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1065270: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1065270
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: paraview
Version: 5.11.2+dfsg-6+b1
Severity: important
Per the title, after a recent upgrade opening any data file with
appended data in 'raw' format, which was possible before the update,
fails with errors like:
vtkXMLDataParser (0x56138248c210): Error parsing XML in stream at line 27,
column 1, byte index 1348: not well-formed (invalid token)
This may be an issue with the system expat library, at least according
to the thread
https://discourse.paraview.org/t/i-cannot-read-a-vtp-file-i-could-open-yesterday-can-someone-try-to-open-it/13938
where the same issue is being discussed for an Arch installation.
As reported there, downgrading libexpat1 to 2.5.0-2+b2 seems to fix the
issue, so it's either an issue in expat or in the way ParaView is using
it (maybe some changed default about the strictness off the parsing?).
-- System Information:
Debian Release: trixie/sid
APT prefers unstable-debug
APT policy: (500, 'unstable-debug'), (500, 'testing-debug'), (500,
'unstable'), (500, 'testing'), (500, 'stable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 6.6.15-amd64 (SMP w/16 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE,
TAINT_UNSIGNED_MODULE
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages paraview depends on:
ii libadios2-mpi-c++11-2 2.9.2+dfsg1-13
ii libavcodec60 10:6.1.1-dmo1
ii libavformat60 10:6.1.1-dmo1
ii libavutil58 10:6.1.1-dmo1
ii libc6 2.37-15
ii libdouble-conversion3 3.3.0-1+b1
ii libexpat1 2.6.0-1
ii libfreetype6 2.13.2+dfsg-1+b1
ii libgcc-s1 14-20240201-3
ii libgdal34 3.8.4+dfsg-1
ii libgl2ps1.4 1.4.2+dfsg1-2
ii libglew2.2 2.2.0-4+b1
ii libglx0 1.7.0-1
ii libgmsh4.12 4.12.1+ds1-1
ii libhdf5-openmpi-103-1 1.10.10+repack-3+b1
ii libjpeg62-turbo 1:2.1.5-2+b2
ii liblz4-1 1.9.4-1+b2
ii liblzma5 5.4.5-0.3
ii libnetcdf19 1:4.9.2-3+b1
ii libogg0 1.3.5-3
ii libopengl0 1.7.0-1
ii libopenmpi3 4.1.6-5
ii libpng16-16 1.6.42-1
ii libpython3.11 3.11.8-1
ii libpython3.12 3.12.2-1
ii libqt5core5a 5.15.10+dfsg-7
ii libqt5gui5 5.15.10+dfsg-7
ii libqt5help5 5.15.10-6
ii libqt5network5 5.15.10+dfsg-7
ii libqt5opengl5 5.15.10+dfsg-7
ii libqt5widgets5 5.15.10+dfsg-7
ii libstdc++6 14-20240201-3
ii libswscale7 10:6.1.1-dmo1
ii libtheora0 1.1.1+dfsg.1-16.1+b1
ii libtiff6 4.5.1+git230720-4
ii libx11-6 2:1.8.7-1
ii libxcursor1 1:1.2.1-1
ii libxml2 2.9.14+dfsg-1.3+b2
ii python3-matplotlib 3.6.3-1+b2
ii python3-mpi4py 3.1.5-5
ii tcl [tclsh] 8.6.13+b1
ii zlib1g 1:1.3.dfsg-3+b1
Versions of packages paraview recommends:
ii mpi-default-bin 1.15
ii paraview-doc 5.11.2+dfsg-6
ii python3-paraview 5.11.2+dfsg-6+b1
Versions of packages paraview suggests:
pn h5utils <none>
ii hdf5-tools 1.10.10+repack-3+b1
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: paraview
Source-Version: 5.11.2+dfsg-7
Done: Drew Parsons <[email protected]>
We believe that the bug you reported is fixed in the latest version of
paraview, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <[email protected]> (supplier of updated paraview package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 19 May 2024 21:30:46 +0200
Source: paraview
Architecture: source
Version: 5.11.2+dfsg-7
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team
<[email protected]>
Changed-By: Drew Parsons <[email protected]>
Closes: 1065270
Changes:
paraview (5.11.2+dfsg-7) unstable; urgency=medium
.
* Team upload.
* debian patch VTK_XML_append_with_newer_expat.patch applies
upstream patch (vtk9 09_newer_expat.patch) to re-enable handling
of appended data. See Bug#1064762. Closes: #1065270.
Checksums-Sha1:
54bfbd1f59e83299e08eb73231ed5fc4d7bb30b1 3241 paraview_5.11.2+dfsg-7.dsc
b1d417f741ded86d6d1873dbef72aeec697ee5da 41856
paraview_5.11.2+dfsg-7.debian.tar.xz
11b770348bf657ce08d5e4a9b2ea6aef30e5a5bd 34303
paraview_5.11.2+dfsg-7_source.buildinfo
Checksums-Sha256:
b5683b90d2f2f9be89e5c209172970285e6c7a02b61d0f879857b817030cb9b7 3241
paraview_5.11.2+dfsg-7.dsc
9ad38fc5d6bf7f0f33e3eee68bf3de2d1aff9f29519d139089d96e8a6105022c 41856
paraview_5.11.2+dfsg-7.debian.tar.xz
ed7d66adae804f21cf8c34d31e1f819c22f632b06dfddf8b6e9fd4fd4c96eace 34303
paraview_5.11.2+dfsg-7_source.buildinfo
Files:
80c432cd0ddce5a602b4ff3907b108d7 3241 science optional
paraview_5.11.2+dfsg-7.dsc
b1b9ae2e38d132fbc7449083e15b1601 41856 science optional
paraview_5.11.2+dfsg-7.debian.tar.xz
0d968a28452d83926cf557a504f385d6 34303 science optional
paraview_5.11.2+dfsg-7_source.buildinfo
-----BEGIN PGP SIGNATURE-----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=yN7p
-----END PGP SIGNATURE-----
pgpd42zKMO5Tz.pgp
Description: PGP signature
--- End Message ---
--
debian-science-maintainers mailing list
[email protected]
https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers