Your message dated Sun, 10 Nov 2024 17:49:08 +0000
with message-id <[email protected]>
and subject line Bug#1086864: fixed in dune-common 2.9.0-8
has caused the Debian Bug report #1086864,
regarding dune-common: dune-debian.env needs to be updated for OpenMPI 5
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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1086864: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1086864
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: dune-common
Version: 2.9.0-7
Severity: important
Affects: src:dune-grid src:dune-grid-glue
Tags: patch
Dear maintainer:
The file /usr/share/dune/dune-debian.mk needs to be updated
for OpenMPI 5.0. Patch attached.
(In some cases I've seen this issue being solved by
adding the new variables (i.e. keeping also the old ones),
which I guess would ease backports, but I'm not sure what's
the policy you want to follow for dune-related packages).
Thanks.
diff -Nru dune-common-2.9.0/debian/changelog dune-common-2.9.0/debian/changelog
--- dune-common-2.9.0/debian/changelog 2024-10-10 14:59:54.000000000 +0000
+++ dune-common-2.9.0/debian/changelog 2024-11-06 17:46:00.000000000 +0000
@@ -1,3 +1,10 @@
+dune-common (2.9.0-8) unstable; urgency=medium
+
+ * d/dune-debian.env: Use new OpenMPI 5 environment variables
+ to allow oversubscription and set the SSH agent. Closes: #######.
+
+ -- Markus Blatt <[email protected]> Wed, 06 Nov 2024 18:46:00 +0100
+
dune-common (2.9.0-7) unstable; urgency=medium
* d/control: Depend on pkgconf instead of obsolete pkg-config
diff -Nru dune-common-2.9.0/debian/dune-debian.env
dune-common-2.9.0/debian/dune-debian.env
--- dune-common-2.9.0/debian/dune-debian.env 2022-02-16 12:24:55.000000000
+0000
+++ dune-common-2.9.0/debian/dune-debian.env 2024-11-06 17:44:06.000000000
+0000
@@ -1,6 +1,6 @@
# OpenMPI looks for a rsh program, even when it only starts local processes.
-export OMPI_MCA_plm_rsh_agent=/bin/false
+export PRTE_MCA_plm_ssh_agent=/bin/false
# Don't limit number of MPI ranks to number of cores (when running tests),
# see https://bugs.debian.org/850229
-export OMPI_MCA_rmaps_base_oversubscribe=1
+export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe
--- End Message ---
--- Begin Message ---
Source: dune-common
Source-Version: 2.9.0-8
Done: Markus Blatt <[email protected]>
We believe that the bug you reported is fixed in the latest version of
dune-common, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Markus Blatt <[email protected]> (supplier of updated dune-common package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 07 Nov 2024 16:59:08 +0100
Source: dune-common
Architecture: source
Version: 2.9.0-8
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Markus Blatt <[email protected]>
Closes: 1086864
Changes:
dune-common (2.9.0-8) unstable; urgency=medium
.
* d/dune-debian.env: Use new OpenMPI 5 environment variables
to allow oversubscription and set the SSH agent. Closes: #1086864
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