Your message dated Fri, 06 Dec 2024 20:55:42 +0000
with message-id <[email protected]>
and subject line Bug#1088789: fixed in adios2 2.10.2+dfsg1-1
has caused the Debian Bug report #1088789,
regarding adios2: FTBFS with HDF5 1.14: dh_missing: warning:
usr/lib/x86_64-linux-gnu/libadios2_h5vol.so exists in install-serial but is not
installed to anywhere
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1088789: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1088789
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: adios2
Version: 2.10.1+dfsg1-13
Severity: important
Tags: ftbfs patch
-----BEGIN PGP SIGNED MESSAGE-----
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Hi,
During a test rebuild with HDF5 1.14 currently in experimental adios2 FTBFS
with:
dh_missing: warning: usr/lib/x86_64-linux-gnu/libadios2_h5vol.so exists in
install-serial but is not installed to anywhere
dh_missing: error: missing files, aborting
I propose to temporarily workaround this by disabling HDF5_VOL. Patch attached.
Best,
_g.
- -- System Information:
Debian Release: 12.0
Architecture: amd64 (x86_64)
Kernel: Linux 6.1.0-26-amd64 (SMP w/12 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
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diff -Nru adios2-2.10.1+dfsg1/debian/changelog
adios2-2.10.1+dfsg1/debian/changelog
--- adios2-2.10.1+dfsg1/debian/changelog 2024-12-01 02:00:25.000000000
+0100
+++ adios2-2.10.1+dfsg1/debian/changelog 2024-12-01 14:36:06.000000000
+0100
@@ -1,3 +1,10 @@
+adios2 (2.10.1+dfsg1-13.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload.
+ * Disable HDF5_VOL to workaround FTBFS with HDF5 1.14
+
+ -- Gilles Filippini <[email protected]> Sun, 01 Dec 2024 14:36:06 +0100
+
adios2 (2.10.1+dfsg1-13) unstable; urgency=medium
* Team upload.
diff -Nru adios2-2.10.1+dfsg1/debian/rules adios2-2.10.1+dfsg1/debian/rules
--- adios2-2.10.1+dfsg1/debian/rules 2024-12-01 02:00:25.000000000 +0100
+++ adios2-2.10.1+dfsg1/debian/rules 2024-12-01 14:36:06.000000000 +0100
@@ -49,6 +49,7 @@
-DADIOS2_USE_Blosc:BOOL=ON \
-DADIOS2_USE_Fortran:BOOL=ON \
-DADIOS2_USE_HDF5:BOOL=ON \
+ -DADIOS2_USE_HDF5_VOL:BOOL=OFF \
-DADIOS2_USE_PNG:BOOL=ON \
-DADIOS2_USE_SST:BOOL=ON \
-DADIOS2_USE_ZeroMQ:BOOL=ON \
--- End Message ---
--- Begin Message ---
Source: adios2
Source-Version: 2.10.2+dfsg1-1
Done: Drew Parsons <[email protected]>
We believe that the bug you reported is fixed in the latest version of
adios2, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <[email protected]> (supplier of updated adios2 package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 06 Dec 2024 20:34:50 +0100
Source: adios2
Architecture: source
Version: 2.10.2+dfsg1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Drew Parsons <[email protected]>
Closes: 1088789
Changes:
adios2 (2.10.2+dfsg1-1) unstable; urgency=medium
.
* New upstream release
* update debian patch cmake_config_flavor.patch to add build flavour
and soname to h5vol support library. Used with HDF5 v1.14.
Conditionally install in libadios2-*-auxiliary* packages.
Closes: #1088789.
* update intra-source-package-circular-dependency lintian overrides
in debian/source/lintian-overrides
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Files:
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951bdcdf88480dd2e6c7b662e66d9c4f 3591144 libs optional
adios2_2.10.2+dfsg1.orig.tar.xz
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adios2_2.10.2+dfsg1-1.debian.tar.xz
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