Your message dated Wed, 08 Oct 2025 19:49:34 +0000
with message-id <[email protected]>
and subject line Bug#1116783: fixed in lmfit-py 1.3.3-5
has caused the Debian Bug report #1116783,
regarding lmfit-py: FTBFS with the nocheck build profile
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
1116783: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1116783
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:lmfit-py
Version: 1.3.3-4
Severity: important
Tags: forky sid ftbfs
User: [email protected]
Usertags: ftbfs-nocheck-profile
Dear maintainer:
During a rebuild of all packages in unstable using the nocheck build profile,
your package failed to build.
Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202509/
A wiki page discussing how to reproduce bugs in this category and
possible solutions is available here:
https://wiki.debian.org/qa.debian.org/FTBFS/Nocheck
(It's a wiki, so you are welcome to contribute)
[ Note: This is RC, but I will wait at least two weeks before raising
the severities, there are a lot of gcc-15 and CMake 4 bugs open now ].
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:lmfit-py, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
pybuild --clean -i python{version} -p 3.13
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
dh_autoreconf_clean -O--buildsystem=pybuild
debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
find . -name "*.pickle" -delete
rm -rf doc/examples
if [ -f lmfit/version.py.orig ] ; then mv lmfit/version.py.orig
lmfit/version.py ; fi
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-lmfit.substvars
debian/python-lmfit-doc.substvars debian/files
rm -fr -- debian/python3-lmfit/ debian/tmp/ debian/python-lmfit-doc/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path
.\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o
-type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a \( -name autom4te.cache -o -name __pycache__ \)
-prune -exec rm -rf {} + \) \)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cp -a lmfit/version.py lmfit/version.py.orig
dh_auto_configure
pybuild --configure -i python{version} -p 3.13
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -O--buildsystem=pybuild
pybuild --build -i python{version} -p 3.13
I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build"
module
I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation
--wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_lmfit
* Building wheel...
/usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82:
SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
!!
********************************************************************************
Please use a simple string containing a SPDX expression for
`project.license`. You can also use `project.license-files`. (Both options
available on setuptools>=77.0.0).
By 2026-Feb-18, you need to update your project and remove deprecated
calls
or your builds will no longer be supported.
See
https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license
for details.
********************************************************************************
!!
corresp(dist, value, root_dir)
/usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61:
SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX
license expression:
License :: OSI Approved :: BSD License
See
https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license
for details.
********************************************************************************
!!
dist._finalize_license_expression()
/usr/lib/python3/dist-packages/setuptools/dist.py:759:
SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX
license expression:
License :: OSI Approved :: BSD License
See
https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license
for details.
********************************************************************************
!!
self._finalize_license_expression()
running bdist_wheel
running build
running build_py
creating build/lib/lmfit
copying lmfit/minimizer.py -> build/lib/lmfit
copying lmfit/confidence.py -> build/lib/lmfit
copying lmfit/__init__.py -> build/lib/lmfit
copying lmfit/models.py -> build/lib/lmfit
copying lmfit/_ampgo.py -> build/lib/lmfit
copying lmfit/version.py -> build/lib/lmfit
copying lmfit/model.py -> build/lib/lmfit
copying lmfit/parameter.py -> build/lib/lmfit
copying lmfit/lineshapes.py -> build/lib/lmfit
copying lmfit/printfuncs.py -> build/lib/lmfit
copying lmfit/jsonutils.py -> build/lib/lmfit
running egg_info
writing lmfit.egg-info/PKG-INFO
writing dependency_links to lmfit.egg-info/dependency_links.txt
writing requirements to lmfit.egg-info/requires.txt
writing top-level names to lmfit.egg-info/top_level.txt
reading manifest file 'lmfit.egg-info/SOURCES.txt'
adding license file 'LICENSE'
adding license file 'AUTHORS.txt'
writing manifest file 'lmfit.egg-info/SOURCES.txt'
installing to build/bdist.linux-x86_64/wheel
running install
running install_lib
creating build/bdist.linux-x86_64/wheel
creating build/bdist.linux-x86_64/wheel/lmfit
copying build/lib/lmfit/minimizer.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/confidence.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/__init__.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/models.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/_ampgo.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/version.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/model.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/parameter.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/lineshapes.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/printfuncs.py -> build/bdist.linux-x86_64/wheel/./lmfit
copying build/lib/lmfit/jsonutils.py -> build/bdist.linux-x86_64/wheel/./lmfit
running install_egg_info
Copying lmfit.egg-info to build/bdist.linux-x86_64/wheel/./lmfit-1.3.3.egg-info
running install_scripts
creating build/bdist.linux-x86_64/wheel/lmfit-1.3.3.dist-info/WHEEL
creating
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_lmfit/.tmp-5040a6ra/lmfit-1.3.3-py3-none-any.whl'
and adding 'build/bdist.linux-x86_64/wheel' to it
adding 'lmfit/__init__.py'
adding 'lmfit/_ampgo.py'
adding 'lmfit/confidence.py'
adding 'lmfit/jsonutils.py'
adding 'lmfit/lineshapes.py'
adding 'lmfit/minimizer.py'
adding 'lmfit/model.py'
adding 'lmfit/models.py'
adding 'lmfit/parameter.py'
adding 'lmfit/printfuncs.py'
adding 'lmfit/version.py'
adding 'lmfit-1.3.3.dist-info/licenses/AUTHORS.txt'
adding 'lmfit-1.3.3.dist-info/licenses/LICENSE'
adding 'lmfit-1.3.3.dist-info/METADATA'
adding 'lmfit-1.3.3.dist-info/WHEEL'
adding 'lmfit-1.3.3.dist-info/top_level.txt'
adding 'lmfit-1.3.3.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Successfully built lmfit-1.3.3-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with
"installer" module
dh: command-omitted: The call to "dh_auto_test -O--buildsystem=pybuild" was
omitted due to "DEB_BUILD_OPTIONS=nocheck"
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=pybuild
dh_prep -O--buildsystem=pybuild
rm -f -- debian/python3-lmfit.substvars
debian/python-lmfit-doc.substvars
rm -fr -- debian/.debhelper/generated/python3-lmfit/
debian/python3-lmfit/ debian/tmp/ debian/.debhelper/generated/python-lmfit-doc/
debian/python-lmfit-doc/
dh_auto_install -O--buildsystem=pybuild
install -m0755 -d /<<PKGBUILDDIR>>/debian/tmp
pybuild --install -i python{version} -p 3.13
--dest-dir=/<<PKGBUILDDIR>>/debian/tmp
I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir
rm -f debian/python-lmfit-doc.debhelper.log
debian/python3-lmfit.debhelper.log
debian/rules override_dh_installdocs-indep
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mv examples/example_emcee_Model_interface.py
examples/nodoc_example_emcee_Model_interface.py
cp doc/sphinx/ext_mathjax.py doc/extensions.py
PYTHONPATH=. http_proxy='localhost' python3 -m sphinx -N -bhtml -D
mathjax_path="/usr/share/javascript/mathjax/MathJax.js" doc/ .pybuild/html #
HTML generator
Running Sphinx v8.2.3
Configuration error!
Versions
========
* Platform: linux;
(Linux-6.12.48+deb13-cloud-amd64-x86_64-with-glibc2.41)
* Python version: 3.13.7 (CPython)
* Sphinx version: 8.2.3
* Docutils version: 0.21.2
* Jinja2 version: 3.1.6
* Pygments version: 2.18.0
Last Messages
=============
None.
Loaded Extensions
=================
None.
Traceback
=========
File "/usr/lib/python3/dist-packages/sphinx/config.py", line 616, in
eval_config_file
raise ConfigError(msg % traceback.format_exc()) from exc
sphinx.errors.ConfigError: There is a programmable error in your
configuration file:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/config.py", line 601, in
eval_config_file
exec(code, namespace) # NoQA: S102
~~~~^^^^^^^^^^^^^^^^^
File "/<<PKGBUILDDIR>>/doc/conf.py", line 14, in <module>
import lmfit
File "/<<PKGBUILDDIR>>/lmfit/__init__.py", line 38, in <module>
from .confidence import conf_interval, conf_interval2d
File "/<<PKGBUILDDIR>>/lmfit/confidence.py", line 10, in <module>
from .minimizer import MinimizerException
File "/<<PKGBUILDDIR>>/lmfit/minimizer.py", line 41, in <module>
from .parameter import Parameter, Parameters
File "/<<PKGBUILDDIR>>/lmfit/parameter.py", line 14, in <module>
from .jsonutils import decode4js, encode4js
File "/<<PKGBUILDDIR>>/lmfit/jsonutils.py", line 8, in <module>
import dill
ModuleNotFoundError: No module named 'dill'
The full traceback has been saved in:
/tmp/sphinx-err-yc4177yz.log
To report this error to the developers, please open an issue at
<https://github.com/sphinx-doc/sphinx/issues/>. Thanks!
Please also report this if it was a user error, so that a better error message
can be provided next time.
make[1]: *** [debian/rules:30: override_dh_installdocs-indep] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:15: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Source: lmfit-py
Source-Version: 1.3.3-5
Done: Santiago Vila <[email protected]>
We believe that the bug you reported is fixed in the latest version of
lmfit-py, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Santiago Vila <[email protected]> (supplier of updated lmfit-py package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 08 Oct 2025 20:20:00 +0200
Source: lmfit-py
Architecture: source
Version: 1.3.3-5
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Santiago Vila <[email protected]>
Closes: 1116783
Changes:
lmfit-py (1.3.3-5) unstable; urgency=medium
.
* Team upload.
* d/changelog: Fix typo in previous release.
* d/control: Drop <!nocheck> from python3-dill. Closes: #1116783.
* d/control: Drop "Rules-Requires-Root: no" (default).
* d/control: Update standards-version.
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Files:
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