Your message dated Fri, 02 Dec 2016 12:04:45 +0000 with message-id <[email protected]> and subject line Bug#846351: fixed in h5py 2.6.0-2 has caused the Debian Bug report #846351, regarding h5py: FTBFS against hdf5 1.10 - Fail to detect HDF5 install dir to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 846351: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=846351 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: h5py Version: 2.6.0-1 Severity: serious Justification: FTBFS -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Hi, h5py FTBFS against hdf5-1.10 with: ====================================================================== ERROR: test_force_swmr_mode_off_raises (h5py.tests.hl.test_dataset_swmr.TestDatasetSwmrRead) Switching SWMR write mode off is only possible by closing the file. - ---------------------------------------------------------------------- Traceback (most recent call last): File "h5py/tests/hl/test_dataset_swmr.py", line 58, in setUp self.f = h5py.File(fname, 'r', swmr=True) File "h5py/_hl/files.py", line 272, in __init__ fid = make_fid(name, mode, userblock_size, fapl, swmr=swmr) File "h5py/_hl/files.py", line 91, in make_fid flags |= h5f.ACC_SWMR_READ AttributeError: 'module' object has no attribute 'ACC_SWMR_READ' ... - ---------------------------------------------------------------------- Ran 423 tests in 1.568s FAILED (errors=9, skipped=10, expected failures=7) Previously in the buildlog there is: ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.8.4' MPI Enabled: False Rebuild Required: False ******************************************************************************** Then I tried with HDF5_DIR=/usr/lib/$(DEB_HOST_MULTIARCH)/hdf5/serial and this time the build was successful. Thanks, _g. - -- System Information: Debian Release: stretch/sid APT prefers testing APT policy: (500, 'testing') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 4.7.0-1-amd64 (SMP w/2 CPU cores) Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) -----BEGIN PGP SIGNATURE----- iQEcBAEBCAAGBQJYQLRjAAoJEO/obGx//s+DVjYH/i4LAEgv81YkUIXzuL3o4nkY Szkv9beTJ/05HUPDvetXDNztTP3ECAZ8n9I0OzNEVm1jolVQpAiG9sMXkNag0vXi /M+RTV0thtYh5nKkcF0tPXVKGnRsEikmgErc9LsVDFfW6HFaW83TK+QMXZQd3sXN yO20C5editQa/LhFAeFNy+4MS5NEY9vTICTUr4KN6rGF9MQUZ8Gygz4UXZ1jBfhJ 73OFn0TobitVgLtIrc78V674COjhWyQaNL88vYkoV0RkdtQatd60eHSuKwurS9P0 oG6qY+lfBGE1iHQyAmb6Hja98RIhd/nCG6vbQlRKIBY8/NDzMwhJZjMjqWigyyU= =Z5CO -----END PGP SIGNATURE-----
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--- Begin Message ---Source: h5py Source-Version: 2.6.0-2 We believe that the bug you reported is fixed in the latest version of h5py, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Ghislain Antony Vaillant <[email protected]> (supplier of updated h5py package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Thu, 01 Dec 2016 11:53:05 +0000 Source: h5py Binary: python-h5py python-h5py-dbg python3-h5py python3-h5py-dbg python-h5py-doc Architecture: source Version: 2.6.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers <[email protected]> Changed-By: Ghislain Antony Vaillant <[email protected]> Description: python-h5py - general-purpose Python interface to hdf5 (Python 2) python-h5py-dbg - debug extension for h5py (Python 2) python-h5py-doc - h5py documentation python3-h5py - general-purpose Python interface to hdf5 (Python 3) python3-h5py-dbg - debug extension for h5py (Python 3) Closes: 846351 Changes: h5py (2.6.0-2) unstable; urgency=medium . * Cherry-pick upstream patch fixing HDF5 detection. - New patch Package-Config-Fix-Detection.patch. Thanks to Iain Lane for reporting (Closes: #846351) * Bump standards version to 3.9.8, no changes required. * Use HTTPS for the copyright Format URI. * Drop superfluous Testsuite field. * Mark -doc package Multi-Arch: foreign. * Suggest install of -doc package. * Call dh_numpy{,3} in dh_python{2,3} overrides. * Enable hardening. * Cosmetic fixups in rules file. * Update gbp.conf with current repository layout. * Simplify the packaging testsuite. Checksums-Sha1: cb2e906d80bb18d8d4a35bbda8e94acefbc157d6 2574 h5py_2.6.0-2.dsc 8693d06de813a667d56bdbb315323d0780712b0d 6860 h5py_2.6.0-2.debian.tar.xz Checksums-Sha256: f32f48db80de33ed74fa27d83ba46ec2441c721f68c6db5613b083aaa48173f1 2574 h5py_2.6.0-2.dsc 737ac74ecd7e8cbfbd95a93c1a95642ced2e9d07b6a44bd5d64a2faf991931e4 6860 h5py_2.6.0-2.debian.tar.xz Files: 9a785ad2920f9d82852631af4120cf55 2574 python optional h5py_2.6.0-2.dsc 5ca788b1eb1aab9599cdd7606acb3a16 6860 python optional h5py_2.6.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- Version: GnuPG v2 iQIcBAEBCAAGBQJYQV6JAAoJEPNPCXROn13ZeJUQAIpcvqlzXH9QPiksGrjrjt6j eajiLvr5xaHw2KXQVxSFN9HT4ek+3OFhIpC8NFtAeH4yJ+FlVnqS+1mH50XCDOB/ Bpgn3dDITaPkBzaOrT5VmfoneI/jACzsO/v5gH2CpQ/WhMu/UdhZO0sUxPtRPcTy iUinkwnVCEge0ZMXuPM0HFAjKZLE78cvKxg3UWRCUpGP404GFc2U1fHu7MF3wKMf kYVCk6eUxymgNbyBYcjpFiwWQvN92ILo1FZIIwgm/pDhCku88wvDs6Si0KXo8q30 W6R5Zx4/4OS9GbeM4PECR24Hq2XE+vHqY938VFnKh0UpI9OIwiCc+hRp5/Y2Ur3J ZHmEbTn7dW2wDJgtdkKkq/h5uPDbuosRstJlKutD3+xIN4juEl1qFQLgDDbOH8/A at9R4NdnpPoKQa2jDNCd8vYfRrCf5H5xGuelEd57BNUUKA20iZgB96aVTI6vZAbc 6UzJBN0shMM4YnTtRrh0uxcyLM+e00MD0V/ozFDpWsztzQC95aLaleGz97Wd2VU8 zRIPhlTOsLlRT4Dpg7o3OyjHH4++EipqVfCC0OveBjwSj9LiVm6jSpUdOoXMDW+T eTDoT1xn6/3QoOUTOSktO5dVDSfyFaLgJMMaeE0U0yiM0d2Q3wBRxWgzHjnN2BaZ hcLaJCo7JlDPIP+A1oWY =+5px -----END PGP SIGNATURE-----
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