Your message dated Tue, 06 Dec 2016 01:48:39 +0000 with message-id <[email protected]> and subject line Bug#838327: fixed in dune-pdelab 2.5.0~20161204gdb53a76-1 has caused the Debian Bug report #838327, regarding dune-pdelab: FTBFS in testing (error: cannot convert 'mem_usage_t*' to 'GlobalLU_t*') to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 838327: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=838327 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: src:dune-pdelab Version: 2.4.1-1 Severity: serious Dear maintainer: I tried to build this package in stretch with "dpkg-buildpackage -A" (which is what the "Arch: all" autobuilder would do to build it) but it failed: -------------------------------------------------------------------------------- [...] debian/rules build-indep dh build-indep --parallel dh_testdir -i -O--parallel dh_update_autotools_config -i -O--parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/<<PKGBUILDDIR>>' /usr/bin/dunecontrol autogen WARNING: could not find module dune-alugrid, module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! dune-alugrid is suggested by dune-pdelab Skipping dune-alugrid! --- going to build dune-pdelab --- [... snipped ...] libtool: link: g++ -std=c++11 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpermissive -pthread -pthread -Wl,-z -Wl,relro -o .libs/testgridfunctionspace testgridfunctionspace.o -pthread -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags ../../../lib/.libs/libdunepdelab.so -ldunegrid -ldunegeometry -ldunecommon -L/usr/lib/openmpi/lib -lmpi -lugS2 -lugS3 -ldevS -lm -pthread g++ -std=c++11 -DHAVE_CONFIG_H -I. -I../../.. -pthread -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -DENABLE_POSIX_CLOCK -I../../.. -DGRIDSDIR="\"./grids\"" -DENABLE_UG -pthread -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -DENABLE_POSIX_CLOCK -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -pthread -DMPIPP_H -DENABLE_MPI=1 -I/usr/include/superlu -DENABLE_SUPERLU -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpermissive -c -o testelasticity-testelasticity.o `test -f 'testelasticity.cc' || echo './'`testelasticity.cc In file included from /usr/include/dune/istl/paamg/amg.hh:13:0, from ../../../dune/pdelab/backend/istl/seqistlsolverbackend.hh:15, from ../../../dune/pdelab/backend/istl/istlsolverbackend.hh:6, from ../../../dune/pdelab/backend/istl.hh:7, from testelasticity.cc:20: /usr/include/dune/istl/superlu.hh: In static member function 'static void Dune::SuperLUSolveChooser<double>::solve(superlu_options_t*, SuperMatrix*, int*, int*, int*, char*, double*, double*, SuperMatrix*, SuperMatrix*, void*, int, SuperMatrix*, SuperMatrix*, double*, double*, double*, double*, mem_usage_t*, SuperLUStat_t*, int*)': /usr/include/dune/istl/superlu.hh:172:34: error: cannot convert 'mem_usage_t*' to 'GlobalLU_t*' for argument '19' to 'void dgssvx(superlu_options_t*, SuperMatrix*, int*, int*, int*, char*, double*, double*, SuperMatrix*, SuperMatrix*, void*, int, SuperMatrix*, SuperMatrix*, double*, double*, double*, double*, GlobalLU_t*, mem_usage_t*, SuperLUStat_t*, int*)' memusage, stat, info); ^ Makefile:1646: recipe for target 'testelasticity-testelasticity.o' failed make[7]: *** [testelasticity-testelasticity.o] Error 1 make[7]: Leaving directory '/<<PKGBUILDDIR>>/dune/pdelab/test' Makefile:2231: recipe for target 'check-am' failed make[6]: *** [check-am] Error 2 make[6]: Leaving directory '/<<PKGBUILDDIR>>/dune/pdelab/test' Makefile:1808: recipe for target 'check-recursive' failed make[5]: *** [check-recursive] Error 1 make[5]: Leaving directory '/<<PKGBUILDDIR>>/dune/pdelab/test' Makefile:638: recipe for target 'check-recursive' failed make[4]: *** [check-recursive] Error 1 make[4]: Leaving directory '/<<PKGBUILDDIR>>/dune/pdelab' Makefile:620: recipe for target 'check-recursive' failed make[3]: *** [check-recursive] Error 1 make[3]: Leaving directory '/<<PKGBUILDDIR>>/dune' Makefile:798: recipe for target 'check-recursive' failed make[2]: *** [check-recursive] Error 1 make[2]: Leaving directory '/<<PKGBUILDDIR>>' dh_auto_test: make -j1 check VERBOSE=1 returned exit code 2 /usr/share/dune/dune-debian.mk:26: recipe for target 'override_dh_auto_test' failed make[1]: *** [override_dh_auto_test] Error 2 make[1]: Leaving directory '/<<PKGBUILDDIR>>' debian/rules:10: recipe for target 'build-indep' failed make: *** [build-indep] Error 2 dpkg-buildpackage: error: debian/rules build-indep gave error exit status 2 -------------------------------------------------------------------------------- Seems a GCC 6 related problem. Thanks.
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--- Begin Message ---Source: dune-pdelab Source-Version: 2.5.0~20161204gdb53a76-1 We believe that the bug you reported is fixed in the latest version of dune-pdelab, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Ansgar Burchardt <[email protected]> (supplier of updated dune-pdelab package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Tue, 06 Dec 2016 02:14:16 +0100 Source: dune-pdelab Binary: libdune-pdelab-dev libdune-pdelab-doc Architecture: all amd64 source Version: 2.5.0~20161204gdb53a76-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers <[email protected]> Changed-By: Ansgar Burchardt <[email protected]> Closes: 838327 Description: libdune-pdelab-dev - toolbox for solving PDEs -- discretization module (development fi libdune-pdelab-doc - toolbox for solving PDEs -- discretization module (documentation) Changes: dune-pdelab (2.5.0~20161204gdb53a76-1) unstable; urgency=medium . * New upstream snapshot. + Fixes build failure with newer SuperLU versions. (Closes: #838327) * Switch to CMake. Checksums-Sha1: 72150953c00c8420b86d98c80e8bc45e9eeb9ef3 2631 dune-pdelab_2.5.0~20161204gdb53a76-1.dsc d9f9237cdcb2c511a72288b454b7f13a1783a5fb 417068 dune-pdelab_2.5.0~20161204gdb53a76.orig.tar.xz 2715f2adbd39c0d2889bfa60661aec32b133608e 4156 dune-pdelab_2.5.0~20161204gdb53a76-1.debian.tar.xz 382ef05d828b4518975659375b71627eb6f2ec18 11092 dune-pdelab_2.5.0~20161204gdb53a76-1_amd64.buildinfo eb3a5490a1ffe4d1b6bb7979b02bee2b2c92282e 106484 libdune-pdelab-dev-dbgsym_2.5.0~20161204gdb53a76-1_amd64.deb ae331048c923bf62e50f52d8a6406674b8fb86af 306062 libdune-pdelab-dev_2.5.0~20161204gdb53a76-1_amd64.deb c43e307d967f37e5ffdddc7de9fe55897b73afe4 18760064 libdune-pdelab-doc_2.5.0~20161204gdb53a76-1_all.deb Checksums-Sha256: 7b36ccea47af00045957c59c4997ceb5559fc6b7acb459318b43610836a2290f 2631 dune-pdelab_2.5.0~20161204gdb53a76-1.dsc 82911e5266d5c13ab7e3b0de1d92878ad8473269ed2bc31afae152272798929d 417068 dune-pdelab_2.5.0~20161204gdb53a76.orig.tar.xz c2261127916b1c38518330ea6e70b7319510782616204ddc570e1d622b7749e2 4156 dune-pdelab_2.5.0~20161204gdb53a76-1.debian.tar.xz dcb12f15c8921e97cd0ee3faedb0b147fcab39e561e3f5b25b84bf81adb6cb58 11092 dune-pdelab_2.5.0~20161204gdb53a76-1_amd64.buildinfo 75f0003d54fd8cc1a9627373cba050bf050206d738cafccba2e43ce53ea19acd 106484 libdune-pdelab-dev-dbgsym_2.5.0~20161204gdb53a76-1_amd64.deb d774c924085a5907dc103d653025ef542674c711be27d965a8f68995c237d78a 306062 libdune-pdelab-dev_2.5.0~20161204gdb53a76-1_amd64.deb f5e5a0ec7802798c1f54eaede2a956e6059cb981e1d6499ef1077a347e2e51b2 18760064 libdune-pdelab-doc_2.5.0~20161204gdb53a76-1_all.deb Files: 1530bfbc5b6f53de897606c00fcdae2f 2631 libs optional dune-pdelab_2.5.0~20161204gdb53a76-1.dsc 8e4c774c11726e8e6af626c5882a2c49 417068 libs optional dune-pdelab_2.5.0~20161204gdb53a76.orig.tar.xz a9db46c38091b10134a9c1efd55b4a43 4156 libs optional dune-pdelab_2.5.0~20161204gdb53a76-1.debian.tar.xz 2399356c6a0b62102619966d8fdbf91d 11092 libs optional dune-pdelab_2.5.0~20161204gdb53a76-1_amd64.buildinfo bb8709eda66203fa00f84be5b70e0d87 106484 debug extra libdune-pdelab-dev-dbgsym_2.5.0~20161204gdb53a76-1_amd64.deb 4619222c0c02dd40bd5c2944ecd2a19f 306062 libdevel optional libdune-pdelab-dev_2.5.0~20161204gdb53a76-1_amd64.deb ff073c88af630fd4a7b4809be735d152 18760064 doc optional libdune-pdelab-doc_2.5.0~20161204gdb53a76-1_all.deb -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEE6XYjQ9o8g2p4zSVKamMCj1p06JMFAlhGFBYSHGFuc2dhckBk ZWJpYW4ub3JnAAoJEGpjAo9adOiTtVkP/1a8HrozyKVOIh9ml1yMnED6+slKCSmB bZwSAiXBAL6W+Sep6obP7afd3x2oGzIKIWNAZ0u9/IHB7Vggf+rbJkECN07gPioK +ariAzYKWTRNQ7s/sVoRfuhQ6rFqe/dnE1gITLmryMylu0jg+oCFomz+/pfw7dcl CNyHb1RzJAIcdIhpzDf3FAtRCAdJbF7Q8xUoyxXik/MoH8nxpaef616PkHqFDNUR iPFoh2XfFVfY2/mWlXv3qlXj/5O7r+hFo0RG0OzaQeaBWKc+U5YB//goJZyPNEMS fTi11nBdGjrflPh0NKj1X45twffddjXCsDsdgSHqXRLDmkaoS4i9AgXFaBBQIL5P P5KKUXJI9mE+S+ge99GrnAoPntpcbGSVHdkLDO86qvfihkYf/Z3+lngXnh4/ElzJ YHtDRaiD4xSMHcPLz6g2zt6rv7Vlj/zMNVJZakuqHqfiKh3AIH96/SwJrPUsYGk3 j6+jLSxq+RO/i09zAhEHPvIilI8V3Olxfi7vNnD30VoSXH7bvMrgY/AZIXGjFc70 CmRgPrSNoH2EDLxnouwZ6rTVfCbFbjSGepKyTYiknXnS4uVBnq3LHkQWn/MLJEDo wKLZyFLBzbe3JzKgWyj5PASBD9zd8LiVjFClAPXzvdi2MBtVoEla5AzDgI57ODL+ 6zNBwpYF23p2 =dE/V -----END PGP SIGNATURE-----
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