Your message dated Tue, 14 Aug 2012 23:00:15 +0000
with message-id <[email protected]>
and subject line Bug#680106: fixed in profisis 1.0.11-1
has caused the Debian Bug report #680106,
regarding ITP: profisis -- Protein binding sites prediction (ISIS)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
680106: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=680106
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: [email protected]
* Package name : profisis
Version : 1.0.5
Upstream Author :
* URL : http://www.predictprotein.org/
* License : GPL
Programming Lang: Perl
Description : Protein binding sites prediction (ISIS)
Protein-protein interaction sites identified from sequence profisis (ISIS) is a
machine learning-based method that identifies interacting residues from
sequence alone. Although the method is developed using transient
protein-protein interfaces from complexes of experimentally known 3D
structures, it never explicitly uses 3D information. Instead, we combine
predicted structural features with evolutionary information. The strongest
predictions of the method reached over 90% accuracy in a cross-validation
experiment. Our results suggest that despite the significant diversity in the
nature of protein-protein interactions, they all share common basic principles
and that these principles are identifiable from sequence alone.
--- End Message ---
--- Begin Message ---
Source: profisis
Source-Version: 1.0.11-1
We believe that the bug you reported is fixed in the latest version of
profisis, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Cedric Staniewski <[email protected]> (supplier of updated profisis package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Mon, 09 Jul 2012 20:22:37 +0200
Source: profisis
Binary: profisis
Architecture: source all
Version: 1.0.11-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Cedric Staniewski <[email protected]>
Description:
profisis - prediction of protein-protein interaction sites from sequence
Closes: 680106
Changes:
profisis (1.0.11-1) unstable; urgency=low
.
* Initial release (Closes: #680106)
.
[Laszlo Kajan <[email protected]>]
* Fixed URL in d/control.
* Put a note about pp-popularity-contest (nagging) in d/README.Debian.
* Added copyright and license of examples/3A1P_A.rdbProf to d/copyright.
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