On 17/07/13 01:02 AM, Adrian Pelin wrote:
> Hello,
>

Hi,

Ray Meta mostly refers to the changes (generalizations) that were made pour 
metagenomes.
These changes are there by default and are described in our paper [1].

You are not the first person who is expecting an option to trigger the meta 
part,
but the 2.x.y series have these changes enabled by default because they also 
work
well on single genomes too.



[1] http://genomebiology.com/2012/13/12/R122#sec3

> Does anyone know how to start Ray Meta specifically? Do you need to pass
> certain args to the Ray process?
>
> I looked in the manual, and it say that Ray Meta is included in the
> package, but does it need to be triggered somehow?
>
> Thank you,
> Adrian
>
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