On 24 janvier 2014 11:03, Peter Huang [[email protected]] wrote: > À : [email protected] > Objet : [Denovoassembler-users] assembly of simulated data > > Dear Ray, > > I am currently trying to assembly some really long reads: average read length > ~8000 bp. I tried to used Ray, but it kind of hanged me for 2 days without > any results. I am curious if it is possible for Ray to do this job. Thanks.
Ray is not designed to handle long noisy reads (ex.: PacBio) because Ray does not correct reads. Maybe that has something to do will your long running time. > > Best, > > Peter > > PS, please let me know if you need my output file as I saved it on the disk. > But it is quite large. Thanks. ------------------------------------------------------------------------------ CenturyLink Cloud: The Leader in Enterprise Cloud Services. Learn Why More Businesses Are Choosing CenturyLink Cloud For Critical Workloads, Development Environments & Everything In Between. Get a Quote or Start a Free Trial Today. http://pubads.g.doubleclick.net/gampad/clk?id=119420431&iu=/4140/ostg.clktrk _______________________________________________ Denovoassembler-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/denovoassembler-users
