This has been fixed a while ago in version 0.5.9-1ubuntu1 in gutsy.
This version is in feisty-backports, too, so feel free to install this
on feisty if it causes problems for you in feisty.
** Changed in: hal (Ubuntu)
Status: Confirmed => Fix Released
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do not eject all USB/Firewire devices
https://bugs.launchpad.net/bugs/63090
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