https://bugs.launchpad.net/ubuntu/+source/gnome-
keyring/+bug/328127/comments/29

Sorry to double post, but I tried this (using passphrase) and everything
went as expected (not need to reboot). So I think that what he said: "It
seams that seahorse does not like the key pair being modified
externaly." seems not true, because then passphrase would not matter.

So basically this bug in short is: "keys produced by ssh-keygen without
passphrase are not valid until system's reboot".

-- 
gnome-keyring-daemon returns Agent admitted failure to sign using the key.
https://bugs.launchpad.net/bugs/328127
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