Thanks Rob.
To make sure what happened: you ran the commands from Post 34 in Bug #572617 
and the problem was solved but you lost a lot of settings. Then you ran the 
command from Post 80 here and the problem is solved without loosing all your 
settings (maybe just a few about your desktop session). Is it right?
Could you then attach here the problematic folder?
cd ~ ; cd backup ; tar -czvf gnome-session.zip gnome-session
The archive will be created inside ~/backup

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[regression-release] Neither compiz nor metacity nor nautilus are run at start
https://bugs.launchpad.net/bugs/467668
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