File-roller developers decided do not add files with a `~` on the end of
their names to new archive in version 2.23.4 , see
https://gitlab.gnome.org/GNOME/file-roller/-/blob/master/NEWS#L3858 :
New features and user visible changes:
[...]
* Do not add the backup files, that is files ending with ~, to
the archive.
It seems we should report this issue to the upstream:
https://gitlab.gnome.org/GNOME/file-roller/-/issues
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https://bugs.launchpad.net/bugs/1571806
Title:
Backup files are silently ignored when using certain archive types
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