AFAIK this is expected behavior: interfaces managed outside
NetworkManager (e.g. in /etc/network/interfaces) are ignored and
considered up (but nothing else is done); unless the value of the key
"managed" (under [ifupdown]) is set to true in
/etc/NetworkManager/NetworkManager.conf. Its value defaults to false.

Now whether that works well with dnsmasq is an entirely different
matter, but if there are issues with that it should be filed as a
separate bug.

Since it's "fixed" in all supported Ubuntu releases (this behavior
predates dnsmasq being enabled by NM), I'm closing this a Fix Released.

** Changed in: network-manager (Ubuntu)
       Status: Triaged => Fix Released

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https://bugs.launchpad.net/bugs/391040

Title:
  When eth0 is unmanaged, system connections for other NICs aren't
  displayed nor used

Status in “network-manager” package in Ubuntu:
  Fix Released

Bug description:
  Binary package hint: network-manager

  If eth0 is assigned a static IP in /etc/network/interfaces,
  then NM doesn't display nor use any system-connections defined for *other* 
NICs.

  I include the output from trying to add a new connection:
  1. I run nm-connection-editor.

  2. I press the Add button, fill some static IP info, ***check the [v] 
Available to all users*** checkbox, and click Apply.
  (the "Invalid setting IPv4 Settings" message is displayed while filling the 
dns server)

  3. The result is that without getting any error message on the GUI,
  the connection is not displayed at all. So one would think that it was
  discarded; however, if I look at the file system, it's there, but it's
  like NM doesn't read it at all. See the output of "sudo ls -lha
  /etc/NetworkManager/system-connections/" below:

  
  Follows the terminal output of the above steps:
  teacher@server:~$ nm-connection-editor 

  (nm-connection-editor:3597): GLib-CRITICAL **: g_hash_table_foreach:
  assertion `hash_table != NULL' failed

  ** (nm-connection-editor:3597): WARNING **: nm_connection_list_new:
  failed to load VPN plugins: Couldn't read VPN .name files directory
  /etc/NetworkManager/VPN.

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings: addresses

  ** (nm-connection-editor:3597): WARNING **: ui_to_setting: IPv4
  address '<none>' missing or invalid!

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: ui_to_setting: IPv4 prefix
  '<none>' missing!

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  ** (nm-connection-editor:3597): WARNING **: Invalid setting IPv4
  Settings

  teacher@server:~$ sudo ls -lha /etc/NetworkManager/system-connections/
  total 12K
  drwxr-xr-x 2 root root 4.0K 2009-06-23 12:32 .
  drwxr-xr-x 4 root root 4.0K 2009-06-21 18:26 ..
  -rw------- 1 root root  337 2009-06-23 12:32 Wired connection 1

  ProblemType: Bug
  Architecture: i386
  DistroRelease: Ubuntu 9.04
  MediaBuild: Ubuntu 9.04 "Jaunty Jackalope" - Release i386 (20090420.1)
  Package: network-manager 0.7.1~rc4.1.cf199a964-0ubuntu2
  ProcEnviron:
   LANG=en_US.UTF-8
   SHELL=/bin/bash
  SourcePackage: network-manager
  Uname: Linux 2.6.28-13-generic i686
  WpaSupplicantLog:

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