I'm experiencing the same bug on a fresh installation of 12.10 (the card
is an HT Omega eClaro, using the same CMI8788 chipset). lspci shows both
the onboard sound and the sound card, but only onboard sound can be
selected.

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https://bugs.launchpad.net/bugs/849905

Title:
  CMI8788 not in sound pref. Does show in lspci

Status in “alsa-driver” package in Ubuntu:
  Confirmed

Bug description:
  Card does not show up as a device in sound preferences, but is
  recognized by lspci.

  !!################################
  !!ALSA Information Script v 0.4.60
  !!################################

  !!Script ran on: Wed Sep 14 10:12:25 UTC 2011

  
  !!Linux Distribution
  !!------------------

  Ubuntu 11.04 \n \l DISTRIB_ID=Ubuntu DISTRIB_DESCRIPTION="Ubuntu
  11.04"

  
  !!DMI Information
  !!---------------

  Manufacturer:      BIOSTAR Group
  Product Name:      TA890GXB HD
  Product Version:    

  
  !!Kernel Information
  !!------------------

  Kernel release:    2.6.38-11-generic
  Operating System:  GNU/Linux
  Architecture:      x86_64
  Processor:         x86_64
  SMP Enabled:       Yes

  
  !!ALSA Version
  !!------------

  Driver version:     1.0.23
  Library version:    1.0.24.1
  Utilities version:  1.0.24.2

  
  !!Loaded ALSA modules
  !!-------------------

  snd_hda_intel

  
  !!Sound Servers on this system
  !!----------------------------

  Pulseaudio:
        Installed - Yes (/usr/bin/pulseaudio)
        Running - Yes

  ESound Daemon:
        Installed - Yes (/usr/bin/esd)
        Running - No

  
  !!Soundcards recognised by ALSA
  !!-----------------------------

   0 [HDMI           ]: HDA-Intel - HDA ATI HDMI
                        HDA ATI HDMI at 0xfe8ec000 irq 43

  
  !!PCI Soundcards installed in the system
  !!--------------------------------------

  01:00.1 Audio device: ATI Technologies Inc RV710/730
  03:06.0 Multimedia audio controller: C-Media Electronics Inc CMI8788 [Oxygen 
HD Audio]

  
  !!Advanced information - PCI Vendor/Device/Subsystem ID's
  !!--------------------------------------------------------

  01:00.1 0403: 1002:aa38
        Subsystem: 1458:aa38
  --
  03:06.0 0401: 13f6:8788
        Subsystem: 13f6:8788

  
  !!Modprobe options (Sound related)
  !!--------------------------------

  snd-atiixp-modem: index=-2
  snd-intel8x0m: index=-2
  snd-via82xx-modem: index=-2
  snd-usb-audio: index=-2
  snd-usb-caiaq: index=-2
  snd-usb-ua101: index=-2
  snd-usb-us122l: index=-2
  snd-usb-usx2y: index=-2
  snd-cmipci: mpu_port=0x330 fm_port=0x388
  snd-pcsp: index=-2
  snd-usb-audio: index=-2

  
  !!Loaded sound module options
  !!--------------------------

  !!Module: snd_hda_intel
        bdl_pos_adj : 
32,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1
        beep_mode : 
0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
        enable : Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y,Y
        enable_msi : -1
        id : 
(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null)
        index : 
-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1
        model : 
(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null)
        patch : 
(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null),(null)
        position_fix : 
0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
        power_save : 0
        power_save_controller : Y
        probe_mask : 
-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1
        probe_only : 
0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
        single_cmd : N

  
  !!HDA-Intel Codec information
  !!---------------------------
  --startcollapse--

  Codec: ATI R6xx HDMI
  Address: 0
  AFG Function Id: 0x1 (unsol 0)
  Vendor Id: 0x1002aa01
  Subsystem Id: 0x00aa0100
  Revision Id: 0x100100
  No Modem Function Group found
  Default PCM:
      rates [0x70]: 32000 44100 48000
      bits [0x2]: 16
      formats [0x5]: PCM AC3
  Default Amp-In caps: N/A
  Default Amp-Out caps: N/A
  GPIO: io=0, o=0, i=0, unsolicited=0, wake=0
  Node 0x02 [Audio Output] wcaps 0x201: Stereo Digital
    Control: name="IEC958 Playback Con Mask", index=0, device=0
    Control: name="IEC958 Playback Pro Mask", index=0, device=0
    Control: name="IEC958 Playback Default", index=0, device=0
    Control: name="IEC958 Playback Switch", index=0, device=0
    Device: name="HDMI 0", type="HDMI", device=3
    Converter: stream=1, channel=0
    Digital: Enabled
    Digital category: 0x0
  Node 0x03 [Pin Complex] wcaps 0x400381: Stereo Digital
    Pincap 0x00000094: OUT Detect HDMI
    Pin Default 0x18560010: [Jack] Digital Out at Int HDMI
      Conn = Digital, Color = Unknown
      DefAssociation = 0x1, Sequence = 0x0
    Pin-ctls: 0x40: OUT
    Unsolicited: tag=03, enabled=1
    Connection: 1
       0x02
  --endcollapse--

  
  !!ALSA Device nodes
  !!-----------------

  crw-rw----  1 root audio 116,  4 Sep 14 04:24 /dev/snd/controlC0
  crw-rw----  1 root audio 116,  3 Sep 14 04:24 /dev/snd/hwC0D0
  crw-rw----  1 root audio 116,  2 Sep 14 04:48 /dev/snd/pcmC0D3p
  crw-rw----  1 root audio 116,  1 Sep 14 04:24 /dev/snd/seq
  crw-rw----  1 root audio 116, 33 Sep 14 04:24 /dev/snd/timer

  /dev/snd/by-path:
  total 0
  drwxr-xr-x 2 root root  60 Sep 14 04:24 .
  drwxr-xr-x 3 root root 160 Sep 14 04:24 ..
  lrwxrwxrwx 1 root root  12 Sep 14 04:24 pci-0000:01:00.1 -> ../controlC0

  
  !!Aplay/Arecord output
  !!------------

  APLAY

  **** List of PLAYBACK Hardware Devices ****
  card 0: HDMI [HDA ATI HDMI], device 3: HDMI 0 [HDMI 0]
    Subdevices: 1/1
    Subdevice #0: subdevice #0

  ARECORD

  **** List of CAPTURE Hardware Devices ****

  !!Amixer output
  !!-------------

  !!-------Mixer controls for card 0 [HDMI]

  Card hw:0 'HDMI'/'HDA ATI HDMI at 0xfe8ec000 irq 43'
    Mixer name  : 'ATI R6xx HDMI'
    Components  : 'HDA:1002aa01,00aa0100,00100100'
    Controls      : 4
    Simple ctrls  : 1
  Simple mixer control 'IEC958',0
    Capabilities: pswitch pswitch-joined penum
    Playback channels: Mono
    Mono: Playback [on]

  
  !!Alsactl output
  !!-------------

  --startcollapse--
  state.HDMI {
        control.1 {
                iface MIXER
                name 'IEC958 Playback Con Mask'
                value 
'0fff000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000'
                comment {
                        access read
                        type IEC958
                        count 1
                }
        }
        control.2 {
                iface MIXER
                name 'IEC958 Playback Pro Mask'
                value 
'0f00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000'
                comment {
                        access read
                        type IEC958
                        count 1
                }
        }
        control.3 {
                iface MIXER
                name 'IEC958 Playback Default'
                value 
'0400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000'
                comment {
                        access 'read write'
                        type IEC958
                        count 1
                }
        }
        control.4 {
                iface MIXER
                name 'IEC958 Playback Switch'
                value true
                comment {
                        access 'read write'
                        type BOOLEAN
                        count 1
                }
        }
  }
  --endcollapse--

  
  !!All Loaded Modules
  !!------------------

  Module
  nls_iso8859_1
  nls_cp437
  vfat
  fat
  binfmt_misc
  parport_pc
  ppdev
  snd_virtuoso
  snd_oxygen
  snd_oxygen_lib
  snd_hda_codec_hdmi
  snd_mpu401_uart
  snd_hda_intel
  snd_hda_codec
  snd_seq_midi
  fglrx
  snd_hwdep
  snd_rawmidi
  snd_pcm
  snd_seq_midi_event
  snd_seq
  snd_timer
  snd_seq_device
  sp5100_tco
  psmouse
  snd
  i2c_piix4
  edac_core
  soundcore
  lp
  edac_mce_amd
  serio_raw
  snd_page_alloc
  k10temp
  joydev
  parport
  usb_storage
  uas
  usbhid
  hid
  ahci
  r8169
  pata_atiixp
  libahci

  
  !!Sysfs Files
  !!-----------

  /sys/class/sound/hwC0D0/init_pin_configs:
  0x03 0x18560010

  /sys/class/sound/hwC0D0/driver_pin_configs:

  /sys/class/sound/hwC0D0/user_pin_configs:

  /sys/class/sound/hwC0D0/init_verbs:

  
  !!ALSA/HDA dmesg
  !!------------------

  [    6.843217] [fglrx] module loaded - fglrx 8.84.60 [Mar 24 2011] with 1 
minors
  [    6.917289] HDA Intel 0000:01:00.1: PCI INT B -> GSI 19 (level, low) -> 
IRQ 19
  [    6.917333] HDA Intel 0000:01:00.1: irq 43 for MSI/MSI-X
  [    6.917350] HDA Intel 0000:01:00.1: setting latency timer to 64
  [    6.950098] hda-intel: Enable sync_write for AMD chipset
  [    7.017783] CMI8788 0000:03:06.0: PCI INT A -> GSI 21 (level, low) -> IRQ 
21
  --
  [   13.418586] [fglrx] Reserved FB block: Unshared offset:1fffb000, size:5000 
  [   13.641782] HDMI hot plug event: Pin=3 Presence_Detect=0 ELD_Valid=0
  [   14.520477] HDMI hot plug event: Pin=3 Presence_Detect=1 ELD_Valid=0
  [   14.858311] r8169 0000:05:00.0: eth0: link up
  --
  [   16.820611] EXT4-fs (loop0): re-mounted. Opts: errors=remount-ro,commit=0
  [   18.484710] hda-intel: IRQ timing workaround is activated for card #0. 
Suggest a bigger bdl_pos_adj.
  [   25.354407] eth0: no IPv6 routers present

  ProblemType: Bug
  DistroRelease: Ubuntu 11.04
  Package: alsa-base 1.0.24+dfsg-0ubuntu1
  ProcVersionSignature: Ubuntu 2.6.38-11.50-generic 2.6.38.8
  Uname: Linux 2.6.38-11-generic x86_64
  NonfreeKernelModules: fglrx
  AlsaDevices:
   total 0
   crw-------  1 root root  116,  1 2011-09-14 05:58 seq
   crw-rw----+ 1 root audio 116, 33 2011-09-14 05:58 timer
  AlsaVersion: Advanced Linux Sound Architecture Driver Version 1.0.23.
  AplayDevices: aplay: device_list:240: no soundcards found...
  Architecture: amd64
  ArecordDevices: arecord: device_list:240: no soundcards found...
  AudioDevicesInUse: Error: command ['fuser', '-v', '/dev/snd/seq', 
'/dev/snd/timer'] failed with exit code 1:
  Date: Wed Sep 14 06:49:57 2011
  InstallationMedia: Ubuntu 11.04 "Natty Narwhal" - Release amd64 (20110427.1)
  PackageArchitecture: all
  ProcEnviron:
   LANGUAGE=en_US:en
   LANG=en_US.UTF-8
   SHELL=/bin/bash
  SourcePackage: alsa-driver
  UpgradeStatus: No upgrade log present (probably fresh install)
  dmi.bios.date: 04/20/2010
  dmi.bios.vendor: American Megatrends Inc.
  dmi.bios.version: 080015
  dmi.board.asset.tag: To Be Filled By O.E.M.
  dmi.board.name: TA890GXB HD
  dmi.board.vendor: BIOSTAR Group
  dmi.chassis.asset.tag: None
  dmi.chassis.type: 3
  dmi.chassis.vendor: BIOSTAR Group
  dmi.modalias: 
dmi:bvnAmericanMegatrendsInc.:bvr080015:bd04/20/2010:svnBIOSTARGroup:pnTA890GXBHD:pvr:rvnBIOSTARGroup:rnTA890GXBHD:rvr:cvnBIOSTARGroup:ct3:cvr:
  dmi.product.name: TA890GXB HD
  dmi.sys.vendor: BIOSTAR Group

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