Same problem. Root backups finish in 
/home/user/sftp:/distantUser@server:22/backupfolder/
With Ubuntu 12.04 and deja-dup 22.0

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https://bugs.launchpad.net/bugs/908791

Title:
  Backing up to ftp or sftp, creates "sftp:" or "ftp:" folder in Deja-
  Dup launch place

Status in Déjà Dup Backup Tool:
  Expired
Status in “deja-dup” package in Ubuntu:
  Confirmed

Bug description:
  1. I'm using up to date ArchLinux, x86_64.
  2.  20.2-2
  3. org.gnome.DejaDup backend 'file'
  org.gnome.DejaDup delete-after 0
  org.gnome.DejaDup exclude-list ['$TRASH', '$DOWNLOAD', '/home/ernestas/dw', 
'/home/ernestas/Muzika', '/home/ernestas/books']
  org.gnome.DejaDup include-list ['$HOME']
  org.gnome.DejaDup last-backup '2011-12-26T15:08:43.807421Z'
  org.gnome.DejaDup last-restore ''
  org.gnome.DejaDup last-run '2011-12-26T15:08:43.807421Z'
  org.gnome.DejaDup periodic true
  org.gnome.DejaDup periodic-period 7
  org.gnome.DejaDup prompt-check ''
  org.gnome.DejaDup root-prompt true
  org.gnome.DejaDup welcomed true
  org.gnome.DejaDup.File icon ''
  org.gnome.DejaDup.File name ''
  org.gnome.DejaDup.File path 
'ftp://ernes...@home.versme.net:21/home/ernestas/backup/'
  org.gnome.DejaDup.File relpath @ay []
  org.gnome.DejaDup.File short-name ''
  org.gnome.DejaDup.File type 'normal'
  org.gnome.DejaDup.File uuid ''
  org.gnome.DejaDup.Rackspace container 'pluto'
  org.gnome.DejaDup.Rackspace username ''
  org.gnome.DejaDup.S3 bucket ''
  org.gnome.DejaDup.S3 folder 'pluto'
  org.gnome.DejaDup.S3 id ''
  org.gnome.DejaDup.U1 folder '/deja-dup/pluto'

  ******

  Let's say I launch Deja-Dup in home directory /home/ernestas. Then it creates 
/home/ernestas/sftp:/ or /home/ernestas/ftp:/ directories at which it places 
backups.
  What dependencies is Deja-Dup missing and why isn't it displaying any errors 
about that?

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