In 12.10, this could be "fixed" by modifying the dconf setting for
systray-whitelist, something like:

gsettings set com.canonical.Unity.Panel systray-whitelist "['all']"

In 13.04, they've broken this entirely: 
http://askubuntu.com/questions/253800/replacement-for-tray-icons-in-13-04 . I 
*think* Canonical's answer is that you shouldn't need anything more than the 
"messaging" indicator (looks like a sealed envelope) that turns blue if you 
have an unread email or IM or something else, but this is not a suitable 
replacement for the native Pidgin icon, which let me:
1. See at a glance that pidgin is running (though I acknowledge I can arguably 
visually scan the dock for a carat by its icon as well)
2. See at a glance whether I have an unread IM (not an unread message from any 
of the sources this icon aggregates, including email)
3. See at a glance whether I'm marked online or away (without clicking)
4. Easily set an away message with a single click from any 
screen/workspace/window

I imagine other people had other additional use cases that aren't
captured by the very rudimentary functionality of the messaging
indicator as well.

This is a regression, a loss of prior functionality.

-- 
You received this bug notification because you are a member of Desktop
Packages, which is subscribed to pidgin in Ubuntu.
https://bugs.launchpad.net/bugs/1072637

Title:
  Pidgin does not appear in the notification area

Status in “pidgin” package in Ubuntu:
  Confirmed

Bug description:
  After upgrading from Ubuntu 12.4 to 12.10 Pidgin no longer visible in 
notification area under the menu where the mail and gwibber is.  In fact no 
instant messenger app is visible there.
  Even when I start Pidgin does not appear there.  It works but the icon does 
not integrate into the notification area menu.

  Gabor

  ProblemType: Bug
  DistroRelease: Ubuntu 12.10
  Package: pidgin 1:2.10.6-0ubuntu2
  ProcVersionSignature: Ubuntu 3.5.0-17.28-generic 3.5.5
  Uname: Linux 3.5.0-17-generic x86_64
  ApportVersion: 2.6.1-0ubuntu6
  Architecture: amd64
  CheckboxSubmission: 6b64e7968cc8e732e5ad2595b83d27cf
  CheckboxSystem: d00f84de8a555815fa1c4660280da308
  Date: Mon Oct 29 10:30:53 2012
  EcryptfsInUse: Yes
  InstallationDate: Installed on 2012-09-26 (32 days ago)
  InstallationMedia: Ubuntu 12.04.1 LTS "Precise Pangolin" - Release amd64 
(20120823.1)
  MarkForUpload: True
  ProcEnviron:
   LANGUAGE=en_US:en
   PATH=(custom, no user)
   XDG_RUNTIME_DIR=<set>
   LANG=en_US.UTF-8
   SHELL=/bin/bash
  SourcePackage: pidgin
  UpgradeStatus: Upgraded to quantal on 2012-10-28 (0 days ago)

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