Although I'm no longer on Ubuntu, I can confirm this issue is affecting
me on a fresh install of Debian Testing. I have the same machine as
Angelicfury1, Thinkpad T530 (which is how I ended up here). I figured I
would add some additional info:

This issue occurs reliably for me every time the machine wakes from
sleep. The cursor is stuck in position, and the touchpad functions as if
the middle button is being held down. In other words, the touchpad is
stuck in "scroll" mode. As with the others, dropping to a different
runlevel and back "fixes" the issue.

This problem did NOT occur on Ubuntu 12.10 with the latest kernel and
drivers from that release, though it's possible my xorg config somehow
prevented this issue from occurring.

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https://bugs.launchpad.net/bugs/991707

Title:
  Mouse pointer (touchpad) gets stuck often

Status in “xorg” package in Ubuntu:
  Incomplete

Bug description:
  In my Ubuntu 12.04, my mouse pointer gets stuck often. I'm talking
  about the touchpad and not the external mouse. The first thought would
  be to check whether we have given the option to lock the touchpad
  while typing. But, my pointer (touchpad) gets stuck simply often. The
  slightest of deductions I have been able to make is that this happens
  sometimes just after using the touchpad scrolling.

  ProblemType: Bug
  DistroRelease: Ubuntu 12.04
  Package: gnome-shell 3.4.1-0ubuntu2
  ProcVersionSignature: Ubuntu 3.2.0-24.37-generic-pae 3.2.14
  Uname: Linux 3.2.0-24-generic-pae i686
  NonfreeKernelModules: wl
  ApportVersion: 2.0.1-0ubuntu6
  Architecture: i386
  Date: Mon Apr 30 12:07:34 2012
  InstallationMedia: Ubuntu 12.04 LTS "Precise Pangolin" - Release i386 
(20120423)
  ProcEnviron:
   LANGUAGE=en_US:en
   TERM=xterm
   PATH=(custom, user)
   LANG=en_US.UTF-8
   SHELL=/bin/bash
  SourcePackage: gnome-shell
  UpgradeStatus: No upgrade log present (probably fresh install)

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