For those that still see this issue, I'm tracking this under bug
#989588.  I think I have a fix and will propose a solution soon.  Please
follow that bug since this bug is already Fix Released.

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https://bugs.launchpad.net/bugs/1003950

Title:
  launcher does not show minimized update manager while clicked

Status in Compiz:
  New
Status in Accelerated Xorg driver for nVidia cards:
  New
Status in Unity:
  Fix Released
Status in Unity 5.0 series:
  Fix Released
Status in Unity 6.0 series:
  Fix Released
Status in binary-driver-fglrx package in Ubuntu:
  New
Status in intel-linux-graphics-installer package in Ubuntu:
  New
Status in unity package in Ubuntu:
  Fix Released
Status in update-manager package in Ubuntu:
  Confirmed
Status in xserver-xorg-video-nouveau package in Ubuntu:
  New
Status in binary-driver-fglrx source package in Precise:
  New
Status in intel-linux-graphics-installer source package in Precise:
  New
Status in unity source package in Precise:
  Fix Released
Status in update-manager source package in Precise:
  Confirmed
Status in xserver-xorg-video-nouveau source package in Precise:
  New
Status in binary-driver-fglrx source package in Quantal:
  Invalid
Status in intel-linux-graphics-installer source package in Quantal:
  Invalid
Status in unity source package in Quantal:
  Fix Released
Status in update-manager source package in Quantal:
  Won't Fix
Status in xserver-xorg-video-nouveau source package in Quantal:
  Invalid

Bug description:
  Found an easy way to reproduce it during brussels sprint:
  1. start deja-dup or update-manager
  2. kill -9 compiz; metacity
  3. compiz --replace

  
  ===============

  Update manager is showing up in the dock but I can click on the icon
  all day and nothing happens. Similarly if I do Super-S or Super-W it
  doesn't show up anywhere.

  Even if I alt-tab to the application nothing shows up. This happens
  only when update manager runs on its own. If I kill it and then launch
  it myself it comes to the foreground just fine.

  I'm not 100% sure whether this is a unity, compiz, or update-manager
  bug but so far my bet is on unity.

  =====Original Report=====
  Bug #877444 is showing again in latest updates, please re-open it. This is 
the exact same problem.

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