I decided that it is about time to do some serious cleanup.
I found no good guide cleaning to the extend I wanted so I wrote one.

This fixed the issue for me.
If anybody comes by this bug - I hope it might help you as well.

If you, like me installed and uninstalled a lot the following might help you to 
clean up.
In my case I had a Server that srated on 12.04 and went through various ppa's 
and ups/downs.
For example I once had issues with KDE leading me to round robin 
uninstalls/reinstalls/purges.
Eventually I realized that set a lot of things to installed which would be no 
more needed or even trigger issues now.
That left me with a lot of crap that affected my otherwise nice new upgrade to 
16.04

To clean up and get rid of a lot without really reinstalling I did the
following:

# First I wanted to get rid of old ppas, especially in case they still would 
overwrite even the newer packages
ppa-purge "ppaname"

Other than just apt-add-repository -r this also tries to revert to the original
See this for more: 
http://askubuntu.com/questions/309966/difference-between-ppa-purge-and-add-apt-repository-r

# Next I got a list of all manual installed packages
comm -23 <(apt-mark showmanual | sort -u) <(gzip -dc 
/var/log/installer/initial-status.gz | sed -n 's/^Package: //p' | sort -u) > 
manual.txt

# Clean up in this file, remove all packages from this list that you would like 
to keep
vim manual.txt


# Then set all these packages from manual to auto installed
while read p; do sudo apt-mark auto ${p}; done <manual-to-remove.txt 

This put a lot into the next autoremove, all desktops I ever tried I recognized 
a lot of the experiments I did the last years.
But other than hard removing them I could be sure that everything still needed 
by dependencies still woudl be fine.

# Now let apt take care of dependencies and do the actual remove
sudo apt-get autoremove

If you are really willing to clean up add --purge to the autoremove - this will 
remove all conffiles that are associated.
Be careful if you are unsure if you want to keep anything.

E voila:
0 upgraded, 0 newly installed, 1359 to remove and 0 not upgraded.
After this operation, 3.810 MB disk space will be freed.

That is a lot of crap :-)

Since these days everything just works (I knew from a test with a live
image) I could now cleanly install kubuntu-desktop and was happy again -
yay.


** Changed in: xorg-server (Ubuntu)
       Status: New => Invalid

-- 
You received this bug notification because you are a member of Desktop
Packages, which is subscribed to xorg-server in Ubuntu.
https://bugs.launchpad.net/bugs/1581370

Title:
  Keyboard/Mouse input dead after upgrade to Xenial

Status in xorg-server package in Ubuntu:
  Invalid

Bug description:
  Following
  https://help.ubuntu.com/community/ReportingBugs#Desktop_Applications
  and https://wiki.ubuntu.com/X/Troubleshooting/Freeze as good as
  applicable:

  dmesg: http://paste.ubuntu.com/16386293/
  /var/log/Xorg.0.log: http://paste.ubuntu.com/16386296/
  /sys/kernel/debug/dri/0/i915_error_state: http://paste.ubuntu.com/16386300/

  Have you experienced just one lockup, or have you had a series of these 
lockups?
  => 100% reproducible

  If you've had several, how often does it occur? Every few hours? Once or 
twice a day? Couple times a week?
  => hits lockup (or just all input devices failing) on everey init of 
lightdm/X11

  When did you first notice it?
  => After Dist-Upgrade from Trusty->Xenial

  
  After changing compositing (Desktop Effects) settings?
  => No changes made yet, let me know if I should

  Only when using compositing (Unity, et al)
  => I had a short moment of a living lxde, but it was not reproducible
  => Tried Unity and KDE as well, but it hangs at the greeter already - before 
the Desktop system is up

  Kernels:
  I noticed also some graphical glitches with the Xenial Kernel (some colors 
are wrong, like highlights would flip to cyan)
  Can't make a screenshot

  Xorg:
  I didn't see an xorg-edgers or ubuntu-x-swat for Xenial yet, so I couldn't 
easily try something here.

  Debugging only works via ssh login atm - but since lokal input is broken 
anyway ...
  If I boot into recovery more without UI and also in Bios Key&Mouse are 
working fine.
  So it shouldn't be a general HW issue.

  It stops me from auto-reporting by telling me about "This is not an official 
Ubuntu package. Please remove any third party package and try again."
  I ran ppa-purge on all I had - still doesn't let me do it.
  I also purged all of gnome/xorg/unity and reinstalled, but no improvement - 
maybe I missed something.
  Since it didn't make a difference I reinstalled what I considered needed 
chrome and google-musicmanager.

  I'm willing to help debugging, but I'm not experienced in doing so for X11 - 
especially since none of the logs I checked contain an obvious error pointing 
me to something.
  If you have more logs to check or some other advice please let me know.

  
  Potentially involved:
  2560 /usr/lib/xorg/Xorg
  2611 /usr/sbin/lightdm
  2650 /usr/sbin/unity-greeter

  ||/ Name                                 Version                 Architecture 
           Description
  
+++-====================================-=======================-=======================-==============================================================================
  ii  lightdm                              1.18.1-0ubuntu1         amd64        
           Display Manager
  ii  unity-greeter                        16.04.2-0ubuntu1        amd64        
           Unity Greeter
  ii  xorg                                 1:7.7+13ubuntu3         amd64        
           X.Org X Window System

  I hope that apport attaches more files to this as it said it would to
  help you check my case and recommend next steps.

  ProblemType: Bug
  DistroRelease: Ubuntu 16.04
  Package: xserver-xorg-core 2:1.18.3-1ubuntu2
  ProcVersionSignature: Ubuntu 4.4.0-22.39-generic 4.4.8
  Uname: Linux 4.4.0-22-generic x86_64
  ApportVersion: 2.20.1-0ubuntu2
  Architecture: amd64
  CompizPlugins: No value set for 
`/apps/compiz-1/general/screen0/options/active_plugins'
  Date: Fri May 13 10:19:21 2016
  DistUpgraded: 2016-05-09 17:56:18,056 DEBUG running doUpdate() 
(showErrors=False)
  DistroCodename: xenial
  DistroVariant: ubuntu
  DkmsStatus: vboxhost, 4.3.38, 4.4.0-22-generic, x86_64: installed
  ExecutablePath: /usr/lib/xorg/Xorg
  ExtraDebuggingInterest: Yes
  GraphicsCard:
   Intel Corporation 2nd Generation Core Processor Family Integrated Graphics 
Controller [8086:0102] (rev 09) (prog-if 00 [VGA controller])
     Subsystem: ASUSTeK Computer Inc. 2nd Generation Core Processor Family 
Integrated Graphics Controller [1043:844d]
  InstallationDate: Installed on 2012-04-29 (1474 days ago)
  InstallationMedia: Ubuntu-Server 12.04 LTS "Precise Pangolin" - Release amd64 
(20120424.1)
  MachineType: System manufacturer System Product Name
  ProcEnviron:
   
  ProcKernelCmdLine: BOOT_IMAGE=/boot/vmlinuz-4.4.0-22-generic 
root=UUID=eacb9ac2-7523-41c7-bde4-b78a3cd3cf97 ro bootdegraded=true nosplash 
apm=on apm=power-off nomdmonddf nomdmonisw nomdmonddf nomdmonisw nomdmonddf 
nomdmonisw nomdmonddf nomdmonisw
  SourcePackage: xorg-server
  UpgradeStatus: Upgraded to xenial on 2016-05-09 (3 days ago)
  dmi.bios.date: 12/04/2012
  dmi.bios.vendor: American Megatrends Inc.
  dmi.bios.version: 0907
  dmi.board.asset.tag: To be filled by O.E.M.
  dmi.board.name: P8H67-I
  dmi.board.vendor: ASUSTeK COMPUTER INC.
  dmi.board.version: Rev 1.xx
  dmi.chassis.asset.tag: Asset-1234567890
  dmi.chassis.type: 3
  dmi.chassis.vendor: Chassis Manufacture
  dmi.chassis.version: Chassis Version
  dmi.modalias: 
dmi:bvnAmericanMegatrendsInc.:bvr0907:bd12/04/2012:svnSystemmanufacturer:pnSystemProductName:pvrSystemVersion:rvnASUSTeKCOMPUTERINC.:rnP8H67-I:rvrRev1.xx:cvnChassisManufacture:ct3:cvrChassisVersion:
  dmi.product.name: System Product Name
  dmi.product.version: System Version
  dmi.sys.vendor: System manufacturer
  version.compiz: compiz 1:0.9.12.2+16.04.20160415-0ubuntu1
  version.ia32-libs: ia32-libs N/A
  version.libdrm2: libdrm2 2.4.67-1
  version.libgl1-mesa-dri: libgl1-mesa-dri 11.2.0-1ubuntu2
  version.libgl1-mesa-dri-experimental: libgl1-mesa-dri-experimental N/A
  version.libgl1-mesa-glx: libgl1-mesa-glx 11.2.0-1ubuntu2
  version.xserver-xorg-core: xserver-xorg-core 2:1.18.3-1ubuntu2
  version.xserver-xorg-input-evdev: xserver-xorg-input-evdev 1:2.10.1-1ubuntu2
  version.xserver-xorg-video-ati: xserver-xorg-video-ati 1:7.7.0-1
  version.xserver-xorg-video-intel: xserver-xorg-video-intel 
2:2.99.917+git20160325-1ubuntu1
  version.xserver-xorg-video-nouveau: xserver-xorg-video-nouveau 
1:1.0.12-1build2
  xserver.bootTime: Wed May 11 18:52:39 2016
  xserver.configfile: default
  xserver.errors:
   
  xserver.logfile: /var/log/Xorg.0.log
  xserver.outputs:
   
  xserver.version: 2:1.18.3-1ubuntu2

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