This bug was fixed in the package nux - 4.0.8+18.10.20180613.3-0ubuntu1

---------------
nux (4.0.8+18.10.20180613.3-0ubuntu1) cosmic; urgency=medium

  * debian/50_check_unity_support:
    - various changes to fix (LP: #1768610):
      + export LIBGL_ALWAYS_SOFTWARE=1 only on command failure
      + run only when called inside an unity session

 -- Marco Trevisan (Treviño) <m...@3v1n0.net>  Wed, 13 Jun 2018 12:20:53
+0000

** Changed in: nux (Ubuntu)
       Status: In Progress => Fix Released

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https://bugs.launchpad.net/bugs/1768610

Title:
  leftover conffile forces GNOME is software rendering

Status in mesa package in Ubuntu:
  New
Status in nux package in Ubuntu:
  Fix Released
Status in mesa source package in Xenial:
  New
Status in nux source package in Xenial:
  In Progress
Status in mesa source package in Artful:
  New
Status in nux source package in Artful:
  In Progress
Status in mesa source package in Bionic:
  New
Status in nux source package in Bionic:
  In Progress

Bug description:
  After an upgrade from 17.10 to 18.04, I noticed that all gnome windows
  animations were gone.  After some digging, it seems that gnome-session
  incorrectly assumes that my graphics has no acceleration, when in fact
  it does: it's a i5-2520M CPU @ 2.50GHz with Intel integrated graphics
  (i915 driver).

  I've tried this with and without the xserver-xorg-video-intel package
  (a.k.a. Intel driver) with the same behavior.

  The output of gnome-session-check-accelerated is: llvmpipe (LLVM 6.0,
  256 bits)  however the system should have DRM 2.0 capability.

  GL checks (e.g. glxinfo, glxgears produce the expected output from a
  working DRM system).

  mesa-utils and mesa-utils-extra are both installed.

  I can't find a work around.  Perhaps there is something wrong with my
  install/upgrade?

  Everything else works fine, although the graphical transitions are no
  longer smooth.  But it would be nice to restore the expected behavior.

  I have attached the log of 'journalctl -b0'

  ProblemType: Bug
  DistroRelease: Ubuntu 18.04
  Package: gnome-session 3.28.1-0ubuntu2
  ProcVersionSignature: Ubuntu 4.15.0-20.21-generic 4.15.17
  Uname: Linux 4.15.0-20-generic x86_64
  ApportVersion: 2.20.9-0ubuntu7
  Architecture: amd64
  CurrentDesktop: ubuntu:GNOME
  Date: Wed May  2 13:06:00 2018
  EcryptfsInUse: Yes
  InstallationDate: Installed on 2016-04-22 (739 days ago)
  InstallationMedia: Ubuntu 16.04 LTS "Xenial Xerus" - Release amd64 
(20160420.1)
  ProcEnviron:
   PATH=(custom, no user)
   XDG_RUNTIME_DIR=<set>
   LANG=en_US.UTF-8
   SHELL=/bin/bash
  SourcePackage: gnome-session
  UpgradeStatus: Upgraded to bionic on 2018-04-27 (5 days ago)

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