This bug was fixed in the package gnome-shell - 3.28.4-0ubuntu18.04.1

---------------
gnome-shell (3.28.4-0ubuntu18.04.1) bionic; urgency=medium

  * New upstream stable release
    - Fix ellipsization in dialog subtitles/bodies (LP: #1809788)
    - dnd: Only handle touch events in wayland (LP: #1817020)
    - windowManager: listen actively to windows being destroyed during WS switch
      (LP: #1812527)
    - Fix unresponsive-app dialog blocking input in other windows (LP: #1740869)
    - Fix regression on missing spread animation (LP: #1827284)
  * d/p/js-fix-invalid-access-errors.patch,
    d/p/js-ui-Choose-some-actors-to-cache-on-the-GPU.patch:
    - Refreshed
  * d/p/switchMonitor-switch-to-next-config-upon-initial-keypress.patch
    - Ensure switch display mode is cyclic (LP: #1772811)
  * debian/control:
    - Depends on mutter 3.28.4-0ubuntu18.04.1
  * d/p/st-widget-Add-missing-g_return_val_if_fail.patch:
    - st-widget: Protect from NULL obj in get_theme_node (LP: #1796606)

 -- Marco Trevisan (Treviño) <[email protected]>  Fri, 10 May 2019
11:43:10 +0100

** Changed in: gnome-shell (Ubuntu Bionic)
       Status: Fix Committed => Fix Released

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https://bugs.launchpad.net/bugs/1740869

Title:
  <something> is not responding window is constantly showing when
  debugging a program

Status in gnome-shell package in Ubuntu:
  Fix Released
Status in gnome-shell source package in Bionic:
  Fix Released
Status in gnome-shell source package in Cosmic:
  Fix Released
Status in gnome-shell source package in Disco:
  Fix Released

Bug description:
  Mentioned window about no responding program is showing and stealing
  focus when I try to debug a Java program in Eclipse. When I click on
  Wait, it disappears for a moment and opens again.

  This renders Ubuntu 17.10 with Gnome 3 nearly useless for program
  debugging.

  ProblemType: Bug
  DistroRelease: Ubuntu 17.10
  Package: mutter 3.26.2-0ubuntu0.1
  ProcVersionSignature: Ubuntu 4.13.0-21.24-generic 4.13.13
  Uname: Linux 4.13.0-21-generic x86_64
  NonfreeKernelModules: nvidia_uvm nvidia_drm nvidia_modeset nvidia
  ApportVersion: 2.20.7-0ubuntu3.6
  Architecture: amd64
  CurrentDesktop: ubuntu:GNOME
  Date: Tue Jan  2 14:22:56 2018
  InstallationDate: Installed on 2017-12-04 (28 days ago)
  InstallationMedia: Ubuntu 17.10 "Artful Aardvark" - Release amd64 (20171018)
  SourcePackage: mutter
  UpgradeStatus: No upgrade log present (probably fresh install)

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