What is your output parameter name is it wps_output or wps output ? Please copy your script here.
Regards Lahiru On Tue, Jun 18, 2013 at 7:57 AM, AMILA RANATUNGA <[email protected]>wrote: > Hi, > > How we can write Airavata out put to a file instead in std out. I tried > something like using API. > > outputParameter.setParameterDescription("wps output"); > ParameterType outputParaType = > outputParameter.addNewParameterType(); > > //if I change the STD_OUT to File > > outputParaType.setType(DataType.FILE); > > > I got the following exception. But I get the output correctly with the > STD_OUT. After that how to save it to custom location? > > > > > <ns:invokingServiceFailed infoModelVersion="2.6" > xmlns:ns="http://airavata.apache.org/schemas/wft/2011/08";> > <ns:notificationSource > ns:serviceID="Workflow1_e5a72bea_ee03_45ac_b8ce_33ab559115e7" > ns:experimentID="Workflow1_e5a72bea-ee03-45ac-b8ce-33ab559115e7" /> > <ns:timestamp>2013-06-18T17:18:18.230+05:30</ns:timestamp> > <ns:description>Error while invoking provider > org.apache.airavata.gfac.provider.impl.LocalProvider dispose method.: > org.apache.airavata.gfac.GFacException: Error while invoking provider > org.apache.airavata.gfac.provider.impl.LocalProvider dispose > method.</ns:description> > <ns:annotation> > <stackTrace>org.apache.airavata.gfac.GFacException: Error while > invoking provider org.apache.airavata.gfac.provider.impl.LocalProvider > dispose method. > at org.apache.airavata.gfac.GFacAPI.disposeProvider(GFacAPI.java:102) > at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:72) > at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53) > at > > org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:330) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:682) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:501) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:186) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:385) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:78) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:378) > at java.lang.Thread.run(Thread.java:722) > Caused by: org.apache.airavata.gfac.provider.GFacProviderException: Error > in retrieving results > at > > org.apache.airavata.gfac.provider.impl.LocalProvider.dispose(LocalProvider.java:138) > at org.apache.airavata.gfac.GFacAPI.disposeProvider(GFacAPI.java:100) > ... 10 more > Caused by: java.lang.Exception: Data for the output parameter 'wps_output' > was not found > at > org.apache.airavata.gfac.utils.OutputUtils.parseStdout(OutputUtils.java:82) > at > > org.apache.airavata.gfac.utils.OutputUtils.fillOutputFromStdout(OutputUtils.java:59) > at > > org.apache.airavata.gfac.provider.impl.LocalProvider.dispose(LocalProvider.java:132) > ... 11 more > </stackTrace> > </ns:annotation> > <ns:receiver ns:serviceID="WPS_invoke" > ns:workflowID="Workflow1_e5a72bea_ee03_45ac_b8ce_33ab559115e7" > ns:workflowTimestep="0" ns:workflowNodeID="WPS_invoke" /> > <ns:failure> > <ns:trace xsi:type="xs:string" xmlns:xs=" > http://www.w3.org/2001/XMLSchema"; > xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; > xmlns:ns="http://airavata.apache.org/schemas/wft/2011/08 > ">org.apache.airavata.gfac.GFacException: > Error while invoking provider > org.apache.airavata.gfac.provider.impl.LocalProvider dispose method. > at org.apache.airavata.gfac.GFacAPI.disposeProvider(GFacAPI.java:102) > at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:72) > at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53) > at > > org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:330) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:682) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:501) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:186) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:385) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:78) > at > > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:378) > at java.lang.Thread.run(Thread.java:722) > Caused by: org.apache.airavata.gfac.provider.GFacProviderException: Error > in retrieving results > at > > org.apache.airavata.gfac.provider.impl.LocalProvider.dispose(LocalProvider.java:138) > at org.apache.airavata.gfac.GFacAPI.disposeProvider(GFacAPI.java:100) > ... 10 more > Caused by: java.lang.Exception: Data for the output parameter 'wps_output' > was not found > at > org.apache.airavata.gfac.utils.OutputUtils.parseStdout(OutputUtils.java:82) > at > > org.apache.airavata.gfac.utils.OutputUtils.fillOutputFromStdout(OutputUtils.java:59) > at > > org.apache.airavata.gfac.provider.impl.LocalProvider.dispose(LocalProvider.java:132) > ... 11 more > </ns:trace> > </ns:failure> > </ns:invokingServiceFailed> > > > > Thank You ! > -- System Analyst Programmer PTI Lab Indiana University
