You can debug the following call in the output handler or LocalProvider code. This is the method to persist the outputs to registry. If you face difficulty, share details about your application description and i can try to debug it.
registry.add(ChildDataType.EXPERIMENT_OUTPUT, outputArray, jobExecutionContext.getExperimentID()); Thanks Raminder On Jun 17, 2014, at 9:56 AM, Nadeem Anjum <[email protected]> wrote: > I found out I needed to change name outputParamType to "StdOut" from "stdout". > > Now the results are retrieved without any exception, but even though > outputArray [1] has value: > > [DataObjectType(key:output1, value:{"hi":"align > executable","computation":"sqrt( abs( input1 * input2 ) )","output1":0} > , type:STDOUT)] > > the result returned by php-sdk's method getOutput has value as "" > > > > key: "output1" > > metaData: null > > type: 0 > > value: "" > > > [1]: > https://github.com/apache/airavata/blob/c83330e98aecfd7d60865d69d1450faf759670d7/modules/gfac/gfac-core/src/main/java/org/apache/airavata/gfac/core/utils/OutputUtils.java#l61 > > > I am not sure where something is going wrong. > > > > On Tue, Jun 17, 2014 at 3:52 PM, Lahiru Gunathilake <[email protected]> wrote: > output content has to be properly matched with output names, As far as I can > see your output name is output1 and output has to be like below > > output1=whatever output you have (file path or string content or some > primitive type values > > > this approach is helpful when you have multiple output types dealing with > workflows. > > > On Tue, Jun 17, 2014 at 8:39 AM, Nadeem Anjum <[email protected]> wrote: > Hello, > > If have registered an application (a genapp module) on my local airavata > server. The experiment completes successfully but an exception is thrown > while retrieving the results. > > ERROR org.apache.airavata.gfac.core.provider.GFacProviderException - Error > in retrieving results > java.lang.Exception: Data for the output parameter 'output1' was not found > at > org.apache.airavata.gfac.core.utils.OutputUtils.parseStdout(OutputUtils.java:137) > > > The output is created as expected in the scratch working directory, in the > file alignApp2.stdout. I just need to retrieve the output as it is created. > > I am not really sure on what parseStdout function in OutputUtils.java [1] is > attempting to do by Pattern Matching (which is causing this exception as no > match is found). > > I will be grateful if someone can clarify this. > > [1]: > https://github.com/apache/airavata/blob/c83330e98aecfd7d60865d69d1450faf759670d7/modules/gfac/gfac-core/src/main/java/org/apache/airavata/gfac/core/utils/OutputUtils.java#l87 > > Thanks, > Nadeem. > > > > -- > System Analyst Programmer > PTI Lab > Indiana University >
