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https://issues.apache.org/jira/browse/AIRAVATA-1364?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14076792#comment-14076792
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Marlon Pierce commented on AIRAVATA-1364:
-----------------------------------------

GROMMACS has the same problem.  I believe there are bugs on the client side in 
the PGA gateway causing this.  Specifically, the  process_inputs method in 
utilities.php may be to blame.

> Experiment executing Amber application fails, when cloned.
> ----------------------------------------------------------
>
>                 Key: AIRAVATA-1364
>                 URL: https://issues.apache.org/jira/browse/AIRAVATA-1364
>             Project: Airavata
>          Issue Type: Bug
>    Affects Versions: 0.13
>         Environment: Airavata server: gw56
> PHP gateway: gw120
>            Reporter: Eroma
>
> Experiment executing Amber application fails when cloned
> 1. Created a fresh experiment in BR2 to run Amber.
> 2. Cloned the above and created two new experiments in Stampede & Trestles.
> 3. Wehen the new experiments launched, didn't get the input file upload 
> message but in experiment summary for each experiments inout files exists.
> 4. Although the files exists, the content is not the originally attached 
> content.
> 5. Thus these cloned experiment fails.
> Observation: 
> The clone didn't fail for LAMMPS, GROMMACS, WRF (the other applications 
> running on multiple resources)



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