Github user tushargosavi commented on a diff in the pull request:

    https://github.com/apache/incubator-apex-core/pull/189#discussion_r48168838
  
    --- Diff: 
engine/src/main/java/com/datatorrent/stram/plan/logical/LogicalPlan.java ---
    @@ -1116,13 +1320,78 @@ public StreamMeta addStream(String id)
       public <T> StreamMeta addStream(String id, Operator.OutputPort<? extends 
T> source, Operator.InputPort<? super T>... sinks)
       {
         StreamMeta s = addStream(id);
    -    s.setSource(source);
    -    for (Operator.InputPort<?> sink: sinks) {
    -      s.addSink(sink);
    +    id = s.id;
    +    ArrayListMultimap<Operator.OutputPort<?>, Operator.InputPort<?>> 
streamMap = ArrayListMultimap.create();
    +    if (!(source instanceof ProxyOutputPort)) {
    +      s.setSource(source);
    +    }
    +    for (Operator.InputPort<?> sink : sinks) {
    +      if (source instanceof ProxyOutputPort || sink instanceof 
ProxyInputPort) {
    +        streamMap.put(source, sink);
    +        streamLinks.put(id, streamMap);
    +      } else {
    +        if (s.getSource() == null) {
    +          s.setSource(source);
    +        }
    +        s.addSink(sink);
    +      }
         }
         return s;
       }
     
    +  /**
    +   * This will be called once the Logical Dag is expanded, and the proxy 
input and proxy output ports are populated with the actual ports that they 
refer to
    +   * This method adds sources and sinks for the StreamMeta objects which 
were left empty in the addStream call.
    +   */
    +  public void applyStreamLinks()
    +  {
    +    for (String id : streamLinks.keySet()) {
    +      StreamMeta s = getStream(id);
    +      for (Map.Entry<Operator.OutputPort<?>, Operator.InputPort<?>> pair : 
streamLinks.get(id).entries()) {
    +        if (s.getSource() == null) {
    +          Operator.OutputPort<?> outputPort = pair.getKey();
    +          while (outputPort instanceof ProxyOutputPort) {
    +            outputPort = ((ProxyOutputPort<?>)outputPort).get();
    +          }
    +          s.setSource(outputPort);
    +        }
    +
    +        Operator.InputPort<?> inputPort = pair.getValue();
    +        while (inputPort instanceof ProxyInputPort) {
    +          inputPort = ((ProxyInputPort<?>)inputPort).get();
    +        }
    +        s.addSink(inputPort);
    +      }
    +    }
    +  }
    +
    +  @SuppressWarnings({ "unchecked", "rawtypes" })
    +  private void addDAGToCurrentDAG(ModuleMeta moduleMeta)
    +  {
    +    LogicalPlan subDag = moduleMeta.getDag();
    +    String subDAGName = moduleMeta.getName();
    +    String name;
    +    for (OperatorMeta operatorMeta : subDag.getAllOperators()) {
    +      name = subDAGName + MODULE_NAMESPACE_SEPARATOR + 
operatorMeta.getName();
    +      this.addOperator(name, operatorMeta.getOperator());
    +      OperatorMeta operatorMetaNew = this.getOperatorMeta(name);
    +      operatorMetaNew.setModuleName(operatorMeta.getModuleName() == null ? 
subDAGName : subDAGName + MODULE_NAMESPACE_SEPARATOR + 
operatorMeta.getModuleName());
    +    }
    +
    +    for (StreamMeta streamMeta : subDag.getAllStreams()) {
    +      OutputPortMeta sourceMeta = streamMeta.getSource();
    +      List<InputPort<?>> ports = new LinkedList<>();
    +      for (InputPortMeta inputPortMeta : streamMeta.getSinks()) {
    +        ports.add(inputPortMeta.getPortObject());
    +      }
    +      InputPort[] inputPorts = ports.toArray(new InputPort[]{});
    +
    +      name = subDAGName + MODULE_NAMESPACE_SEPARATOR + 
streamMeta.getName();
    +      StreamMeta streamMetaNew = this.addStream(name, 
sourceMeta.getPortObject(), inputPorts);
    +      streamMetaNew.setModuleName(streamMeta.getModuleName() == null ? 
subDAGName : subDAGName + "_" + streamMeta.getModuleName());
    --- End diff --
    
    The module name for operators will be different in case of nested modules. 
For example if 
    Operator O1 comes from module M1, and Operator O2 Come from module M2, 
which is inside module M1. Then O1 module name is "M1" and O2 module name is 
"M1$M2".
    
    While adding module M1 in to parent DAG, O1 module name was null and O2 
module name was "M2".  When O1 got added to parent dag its module name becomes 
"M1", and O2's module names becomes "M1$M2"


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