Hi Rares,
Thanks for getting in touch. Would you be able to set the environment variable
ARROW_R_DEV=true, retry the installation, and then, if it still fails, share
the log with us?
Kind regards,
Dragos
> On 30 Apr 2022, at 03:05, Rares Vernica <rvern...@gmail.com> wrote:
>
> Hello,
>
> I'm trying to do install.packages("arrow") in R 3.6.0 on CentOS 7 and it
> errors out like this:
>
> $ cat /etc/redhat-release
> CentOS Linux release 7.9.2009 (Core)
>
> $ R
> R version 3.6.0 (2019-04-26) -- "Planting of a Tree"
>> install.packages("arrow")
> ...
> ** building package indices
> ** installing vignettes
> ** testing if installed package can be loaded from temporary location
> libgcc_s.so.1 must be installed for pthread_cancel to work
> sh: line 1: 7367 Aborted (core dumped)
> '/usr/lib64/R/bin/R' --no-save --slave 2>&1 <
> '/tmp/RtmpLFPpbM/fileda264de3f6a'
> Error: package or namespace load failed for 'arrow' in dyn.load(file,
> DLLpath = DLLpath, ...):
> unable to load shared object
> '/usr/lib64/R/library/00LOCK-arrow/00new/arrow/libs/arrow.so':
> /usr/lib64/R/library/00LOCK-arrow/00new/arrow/libs/arrow.so: undefined
> symbol: _ZN6snappy11RawCompressEPKcmPcPm
> Error: loading failed
> Execution halted
> ERROR: loading failed
> * removing '/usr/lib64/R/library/arrow'
> The downloaded source packages are in
> '/tmp/RtmpBr83oT/downloaded_packages'
> Updating HTML index of packages in '.Library'
> Warning messages:
> 1: In install.packages("arrow") :
> installation of package 'arrow' had non-zero exit status
> 2: In file.create(f.tg) :
> cannot create file '/usr/share/doc/R-3.6.0/html/packages.html', reason
> 'No such file or directory'
> 3: In make.packages.html(.Library) : cannot update HTML package index
>
>
> Is this expected? Is there a workaround?
>
> Thank you!
> Rares
