[
https://issues.apache.org/jira/browse/ATLAS-4530?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
cdmikechen updated ATLAS-4530:
------------------------------
Description:
I upgraded my solr from 7 to 8. When creating a entity, I catch an error
{code}
2022-01-12 17:37:03,670 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:07,016 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:10,369 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:16,929 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:23,489 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:30,043 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:36,600 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:49,575 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:38:15,431 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:38:15,432 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Error while committing index mutations
for transaction [30] on index: search (StandardJanusGraph:765)
org.janusgraph.core.JanusGraphException: Could not execute operation due to
backend exception
at
org.janusgraph.diskstorage.util.BackendOperation.execute(BackendOperation.java:56)
at
org.janusgraph.diskstorage.indexing.IndexTransaction.flushInternal(IndexTransaction.java:152)
at
org.janusgraph.diskstorage.indexing.IndexTransaction.commit(IndexTransaction.java:133)
at
org.janusgraph.diskstorage.BackendTransaction.commitIndexes(BackendTransaction.java:140)
at
org.janusgraph.graphdb.database.StandardJanusGraph.commit(StandardJanusGraph.java:761)
at
org.janusgraph.graphdb.transaction.StandardJanusGraphTx.commit(StandardJanusGraphTx.java:1425)
at
org.janusgraph.graphdb.tinkerpop.JanusGraphBlueprintsGraph$GraphTransaction.doCommit(JanusGraphBlueprintsGraph.java:297)
at
org.apache.tinkerpop.gremlin.structure.util.AbstractTransaction.commit(AbstractTransaction.java:104)
at
org.apache.atlas.repository.graphdb.janus.AtlasJanusGraph.commit(AtlasJanusGraph.java:248)
at
org.apache.atlas.GraphTransactionInterceptor.doCommit(GraphTransactionInterceptor.java:157)
at
org.apache.atlas.GraphTransactionInterceptor.doCommitOrRollback(GraphTransactionInterceptor.java:152)
at
org.apache.atlas.GraphTransactionInterceptor.invoke(GraphTransactionInterceptor.java:91)
at
org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at
org.springframework.aop.framework.CglibAopProxy$DynamicAdvisedInterceptor.intercept(CglibAopProxy.java:671)
at
org.apache.atlas.repository.store.graph.v2.AtlasEntityStoreV2$$EnhancerBySpringCGLIB$$efb454f3.createOrUpdate(<generated>)
at
org.apache.atlas.web.rest.EntityREST.createOrUpdate(EntityREST.java:350)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60)
at
com.sun.jersey.server.impl.model.method.dispatch.AbstractResourceMethodDispatchProvider$TypeOutInvoker._dispatch(AbstractResourceMethodDispatchProvider.java:185)
at
com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75)
at
com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:302)
at
com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1542)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1473)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)
at
com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at
org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:845)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1712)
at
org.apache.atlas.web.filters.AuditFilter.doFilter(AuditFilter.java:104)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1699)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:317)
at
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:127)
at
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:91)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:137)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:111)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.apache.atlas.web.filters.AtlasCSRFPreventionFilter.doFilter(AtlasCSRFPreventionFilter.java:192)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.apache.atlas.web.filters.AtlasAuthenticationFilter.doFilter(AtlasAuthenticationFilter.java:358)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:170)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:63)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.apache.atlas.web.filters.StaleTransactionCleanupFilter.doFilter(StaleTransactionCleanupFilter.java:55)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:215)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.apache.atlas.web.filters.AtlasKnoxSSOAuthenticationFilter.redirectToKnox(AtlasKnoxSSOAuthenticationFilter.java:208)
at
org.apache.atlas.web.filters.AtlasKnoxSSOAuthenticationFilter.doFilter(AtlasKnoxSSOAuthenticationFilter.java:200)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:200)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:116)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:66)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:105)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:56)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:214)
at
org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:177)
at
org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:347)
at
org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:263)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1691)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:582)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:226)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1180)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:512)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1112)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:134)
at org.eclipse.jetty.server.Server.handle(Server.java:534)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:320)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:251)
at
org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:273)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:95)
at
org.eclipse.jetty.io.SelectChannelEndPoint$2.run(SelectChannelEndPoint.java:93)
at
org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.executeProduceConsume(ExecuteProduceConsume.java:303)
at
org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.produceConsume(ExecuteProduceConsume.java:148)
at
org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.run(ExecuteProduceConsume.java:136)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.janusgraph.diskstorage.TemporaryBackendException: Could not
successfully complete backend operation due to repeated temporary exceptions
after PT1M40S
at
org.janusgraph.diskstorage.util.BackendOperation.executeDirect(BackendOperation.java:100)
at
org.janusgraph.diskstorage.util.BackendOperation.execute(BackendOperation.java:54)
... 103 more
Caused by: org.janusgraph.diskstorage.TemporaryBackendException: Unable to
complete query on Solr.
at
org.janusgraph.diskstorage.solr.Solr6Index.storageException(Solr6Index.java:1162)
at
org.janusgraph.diskstorage.solr.Solr6Index.mutate(Solr6Index.java:492)
at
org.janusgraph.diskstorage.indexing.IndexTransaction$1.call(IndexTransaction.java:155)
at
org.janusgraph.diskstorage.indexing.IndexTransaction$1.call(IndexTransaction.java:152)
at
org.janusgraph.diskstorage.util.BackendOperation.executeDirect(BackendOperation.java:68)
... 104 more
Caused by: org.apache.solr.client.solrj.impl.CloudSolrClient$RouteException:
Error from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow.
at
org.apache.solr.client.solrj.impl.CloudSolrClient.directUpdate(CloudSolrClient.java:539)
at
org.apache.solr.client.solrj.impl.CloudSolrClient.sendRequest(CloudSolrClient.java:993)
at
org.apache.solr.client.solrj.impl.CloudSolrClient.requestWithRetryOnStaleState(CloudSolrClient.java:862)
at
org.apache.solr.client.solrj.impl.CloudSolrClient.request(CloudSolrClient.java:793)
at
org.janusgraph.diskstorage.solr.Solr6Index.commitChanges(Solr6Index.java:611)
at
org.janusgraph.diskstorage.solr.Solr6Index.mutate(Solr6Index.java:487)
... 107 more
Caused by:
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow.
at
org.apache.solr.client.solrj.impl.HttpSolrClient.executeMethod(HttpSolrClient.java:627)
at
org.apache.solr.client.solrj.impl.HttpSolrClient.request(HttpSolrClient.java:253)
at
org.apache.solr.client.solrj.impl.HttpSolrClient.request(HttpSolrClient.java:242)
at
org.apache.solr.client.solrj.impl.LBHttpSolrClient.doRequest(LBHttpSolrClient.java:483)
at
org.apache.solr.client.solrj.impl.LBHttpSolrClient.request(LBHttpSolrClient.java:413)
at
org.apache.solr.client.solrj.impl.CloudSolrClient.lambda$directUpdate$47(CloudSolrClient.java:516)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at
org.apache.solr.common.util.ExecutorUtil$MDCAwareThreadPoolExecutor.lambda$execute$128(ExecutorUtil.java:188)
... 3 more
{code}
I searched some informations in solr jira and found that in issue [Regression:
Adding _root_ schema field to existing index causes atomic update
failures|http://example.com]
It seems like that in schema.xml atlas use *_root_* filed that not recommended.
https://solr.apache.org/guide/8_9/indexing-nested-documents.html#schema-configuration
was:
When creating a entity, I catch an error
{code}
2022-01-12 17:37:03,670 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:07,016 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:10,369 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:16,929 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:23,489 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:30,043 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:36,600 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:37:49,575 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:38:15,431 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
failed due to (400)
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow., retry? 0 (CloudSolrClient:897)
2022-01-12 17:38:15,432 ERROR - [pool-2-thread-8 -
47e54dcd-b032-4942-bfbc-52879f409141:] ~ Error while committing index mutations
for transaction [30] on index: search (StandardJanusGraph:765)
org.janusgraph.core.JanusGraphException: Could not execute operation due to
backend exception
at
org.janusgraph.diskstorage.util.BackendOperation.execute(BackendOperation.java:56)
at
org.janusgraph.diskstorage.indexing.IndexTransaction.flushInternal(IndexTransaction.java:152)
at
org.janusgraph.diskstorage.indexing.IndexTransaction.commit(IndexTransaction.java:133)
at
org.janusgraph.diskstorage.BackendTransaction.commitIndexes(BackendTransaction.java:140)
at
org.janusgraph.graphdb.database.StandardJanusGraph.commit(StandardJanusGraph.java:761)
at
org.janusgraph.graphdb.transaction.StandardJanusGraphTx.commit(StandardJanusGraphTx.java:1425)
at
org.janusgraph.graphdb.tinkerpop.JanusGraphBlueprintsGraph$GraphTransaction.doCommit(JanusGraphBlueprintsGraph.java:297)
at
org.apache.tinkerpop.gremlin.structure.util.AbstractTransaction.commit(AbstractTransaction.java:104)
at
org.apache.atlas.repository.graphdb.janus.AtlasJanusGraph.commit(AtlasJanusGraph.java:248)
at
org.apache.atlas.GraphTransactionInterceptor.doCommit(GraphTransactionInterceptor.java:157)
at
org.apache.atlas.GraphTransactionInterceptor.doCommitOrRollback(GraphTransactionInterceptor.java:152)
at
org.apache.atlas.GraphTransactionInterceptor.invoke(GraphTransactionInterceptor.java:91)
at
org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at
org.springframework.aop.framework.CglibAopProxy$DynamicAdvisedInterceptor.intercept(CglibAopProxy.java:671)
at
org.apache.atlas.repository.store.graph.v2.AtlasEntityStoreV2$$EnhancerBySpringCGLIB$$efb454f3.createOrUpdate(<generated>)
at
org.apache.atlas.web.rest.EntityREST.createOrUpdate(EntityREST.java:350)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60)
at
com.sun.jersey.server.impl.model.method.dispatch.AbstractResourceMethodDispatchProvider$TypeOutInvoker._dispatch(AbstractResourceMethodDispatchProvider.java:185)
at
com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75)
at
com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:302)
at
com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108)
at
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
at
com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1542)
at
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1473)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)
at
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)
at
com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)
at
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at
org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:845)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1712)
at
org.apache.atlas.web.filters.AuditFilter.doFilter(AuditFilter.java:104)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1699)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:317)
at
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:127)
at
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:91)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:137)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:111)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.apache.atlas.web.filters.AtlasCSRFPreventionFilter.doFilter(AtlasCSRFPreventionFilter.java:192)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.apache.atlas.web.filters.AtlasAuthenticationFilter.doFilter(AtlasAuthenticationFilter.java:358)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:170)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:63)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.apache.atlas.web.filters.StaleTransactionCleanupFilter.doFilter(StaleTransactionCleanupFilter.java:55)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:215)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.apache.atlas.web.filters.AtlasKnoxSSOAuthenticationFilter.redirectToKnox(AtlasKnoxSSOAuthenticationFilter.java:208)
at
org.apache.atlas.web.filters.AtlasKnoxSSOAuthenticationFilter.doFilter(AtlasKnoxSSOAuthenticationFilter.java:200)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:200)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:116)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:66)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:105)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:56)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at
org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:214)
at
org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:177)
at
org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:347)
at
org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:263)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1691)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:582)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:226)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1180)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:512)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1112)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:134)
at org.eclipse.jetty.server.Server.handle(Server.java:534)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:320)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:251)
at
org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:273)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:95)
at
org.eclipse.jetty.io.SelectChannelEndPoint$2.run(SelectChannelEndPoint.java:93)
at
org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.executeProduceConsume(ExecuteProduceConsume.java:303)
at
org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.produceConsume(ExecuteProduceConsume.java:148)
at
org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.run(ExecuteProduceConsume.java:136)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.janusgraph.diskstorage.TemporaryBackendException: Could not
successfully complete backend operation due to repeated temporary exceptions
after PT1M40S
at
org.janusgraph.diskstorage.util.BackendOperation.executeDirect(BackendOperation.java:100)
at
org.janusgraph.diskstorage.util.BackendOperation.execute(BackendOperation.java:54)
... 103 more
Caused by: org.janusgraph.diskstorage.TemporaryBackendException: Unable to
complete query on Solr.
at
org.janusgraph.diskstorage.solr.Solr6Index.storageException(Solr6Index.java:1162)
at
org.janusgraph.diskstorage.solr.Solr6Index.mutate(Solr6Index.java:492)
at
org.janusgraph.diskstorage.indexing.IndexTransaction$1.call(IndexTransaction.java:155)
at
org.janusgraph.diskstorage.indexing.IndexTransaction$1.call(IndexTransaction.java:152)
at
org.janusgraph.diskstorage.util.BackendOperation.executeDirect(BackendOperation.java:68)
... 104 more
Caused by: org.apache.solr.client.solrj.impl.CloudSolrClient$RouteException:
Error from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow.
at
org.apache.solr.client.solrj.impl.CloudSolrClient.directUpdate(CloudSolrClient.java:539)
at
org.apache.solr.client.solrj.impl.CloudSolrClient.sendRequest(CloudSolrClient.java:993)
at
org.apache.solr.client.solrj.impl.CloudSolrClient.requestWithRetryOnStaleState(CloudSolrClient.java:862)
at
org.apache.solr.client.solrj.impl.CloudSolrClient.request(CloudSolrClient.java:793)
at
org.janusgraph.diskstorage.solr.Solr6Index.commitChanges(Solr6Index.java:611)
at
org.janusgraph.diskstorage.solr.Solr6Index.mutate(Solr6Index.java:487)
... 107 more
Caused by:
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
from server at
http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
Attempted an atomic/partial update to a child doc without indicating the
_root_ somehow.
at
org.apache.solr.client.solrj.impl.HttpSolrClient.executeMethod(HttpSolrClient.java:627)
at
org.apache.solr.client.solrj.impl.HttpSolrClient.request(HttpSolrClient.java:253)
at
org.apache.solr.client.solrj.impl.HttpSolrClient.request(HttpSolrClient.java:242)
at
org.apache.solr.client.solrj.impl.LBHttpSolrClient.doRequest(LBHttpSolrClient.java:483)
at
org.apache.solr.client.solrj.impl.LBHttpSolrClient.request(LBHttpSolrClient.java:413)
at
org.apache.solr.client.solrj.impl.CloudSolrClient.lambda$directUpdate$47(CloudSolrClient.java:516)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at
org.apache.solr.common.util.ExecutorUtil$MDCAwareThreadPoolExecutor.lambda$execute$128(ExecutorUtil.java:188)
... 3 more
{code}
I searched some informations in solr jira and found that in issue [Regression:
Adding _root_ schema field to existing index causes atomic update
failures|http://example.com]
It seems like that in schema.xml atlas use *_root_* filed that not recommended.
https://solr.apache.org/guide/8_9/indexing-nested-documents.html#schema-configuration
> Can not create entity with solr 8
> ---------------------------------
>
> Key: ATLAS-4530
> URL: https://issues.apache.org/jira/browse/ATLAS-4530
> Project: Atlas
> Issue Type: Bug
> Components: atlas-core
> Affects Versions: 2.1.0
> Reporter: cdmikechen
> Priority: Critical
>
> I upgraded my solr from 7 to 8. When creating a entity, I catch an error
> {code}
> 2022-01-12 17:37:03,670 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
> failed due to (400)
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow., retry? 0 (CloudSolrClient:897)
> 2022-01-12 17:37:07,016 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
> failed due to (400)
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow., retry? 0 (CloudSolrClient:897)
> 2022-01-12 17:37:10,369 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
> failed due to (400)
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow., retry? 0 (CloudSolrClient:897)
> 2022-01-12 17:37:16,929 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
> failed due to (400)
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow., retry? 0 (CloudSolrClient:897)
> 2022-01-12 17:37:23,489 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
> failed due to (400)
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow., retry? 0 (CloudSolrClient:897)
> 2022-01-12 17:37:30,043 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
> failed due to (400)
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow., retry? 0 (CloudSolrClient:897)
> 2022-01-12 17:37:36,600 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
> failed due to (400)
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow., retry? 0 (CloudSolrClient:897)
> 2022-01-12 17:37:49,575 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
> failed due to (400)
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow., retry? 0 (CloudSolrClient:897)
> 2022-01-12 17:38:15,431 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Request to collection vertex_index
> failed due to (400)
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow., retry? 0 (CloudSolrClient:897)
> 2022-01-12 17:38:15,432 ERROR - [pool-2-thread-8 -
> 47e54dcd-b032-4942-bfbc-52879f409141:] ~ Error while committing index
> mutations for transaction [30] on index: search (StandardJanusGraph:765)
> org.janusgraph.core.JanusGraphException: Could not execute operation due to
> backend exception
> at
> org.janusgraph.diskstorage.util.BackendOperation.execute(BackendOperation.java:56)
> at
> org.janusgraph.diskstorage.indexing.IndexTransaction.flushInternal(IndexTransaction.java:152)
> at
> org.janusgraph.diskstorage.indexing.IndexTransaction.commit(IndexTransaction.java:133)
> at
> org.janusgraph.diskstorage.BackendTransaction.commitIndexes(BackendTransaction.java:140)
> at
> org.janusgraph.graphdb.database.StandardJanusGraph.commit(StandardJanusGraph.java:761)
> at
> org.janusgraph.graphdb.transaction.StandardJanusGraphTx.commit(StandardJanusGraphTx.java:1425)
> at
> org.janusgraph.graphdb.tinkerpop.JanusGraphBlueprintsGraph$GraphTransaction.doCommit(JanusGraphBlueprintsGraph.java:297)
> at
> org.apache.tinkerpop.gremlin.structure.util.AbstractTransaction.commit(AbstractTransaction.java:104)
> at
> org.apache.atlas.repository.graphdb.janus.AtlasJanusGraph.commit(AtlasJanusGraph.java:248)
> at
> org.apache.atlas.GraphTransactionInterceptor.doCommit(GraphTransactionInterceptor.java:157)
> at
> org.apache.atlas.GraphTransactionInterceptor.doCommitOrRollback(GraphTransactionInterceptor.java:152)
> at
> org.apache.atlas.GraphTransactionInterceptor.invoke(GraphTransactionInterceptor.java:91)
> at
> org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
> at
> org.springframework.aop.framework.CglibAopProxy$DynamicAdvisedInterceptor.intercept(CglibAopProxy.java:671)
> at
> org.apache.atlas.repository.store.graph.v2.AtlasEntityStoreV2$$EnhancerBySpringCGLIB$$efb454f3.createOrUpdate(<generated>)
> at
> org.apache.atlas.web.rest.EntityREST.createOrUpdate(EntityREST.java:350)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at
> com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60)
> at
> com.sun.jersey.server.impl.model.method.dispatch.AbstractResourceMethodDispatchProvider$TypeOutInvoker._dispatch(AbstractResourceMethodDispatchProvider.java:185)
> at
> com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75)
> at
> com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:302)
> at
> com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108)
> at
> com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)
> at
> com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84)
> at
> com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1542)
> at
> com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1473)
> at
> com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)
> at
> com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)
> at
> com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)
> at
> com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)
> at
> com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
> at
> org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:845)
> at
> org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1712)
> at
> org.apache.atlas.web.filters.AuditFilter.doFilter(AuditFilter.java:104)
> at
> org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1699)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:317)
> at
> org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:127)
> at
> org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:91)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:137)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:111)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.apache.atlas.web.filters.AtlasCSRFPreventionFilter.doFilter(AtlasCSRFPreventionFilter.java:192)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.apache.atlas.web.filters.AtlasAuthenticationFilter.doFilter(AtlasAuthenticationFilter.java:358)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:170)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:63)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.apache.atlas.web.filters.StaleTransactionCleanupFilter.doFilter(StaleTransactionCleanupFilter.java:55)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:215)
> at
> org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.apache.atlas.web.filters.AtlasKnoxSSOAuthenticationFilter.redirectToKnox(AtlasKnoxSSOAuthenticationFilter.java:208)
> at
> org.apache.atlas.web.filters.AtlasKnoxSSOAuthenticationFilter.doFilter(AtlasKnoxSSOAuthenticationFilter.java:200)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:200)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:116)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:66)
> at
> org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:105)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:56)
> at
> org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
> at
> org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
> at
> org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:214)
> at
> org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:177)
> at
> org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:347)
> at
> org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:263)
> at
> org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1691)
> at
> org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:582)
> at
> org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
> at
> org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
> at
> org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:226)
> at
> org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1180)
> at
> org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:512)
> at
> org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
> at
> org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1112)
> at
> org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
> at
> org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:134)
> at org.eclipse.jetty.server.Server.handle(Server.java:534)
> at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:320)
> at
> org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:251)
> at
> org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:273)
> at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:95)
> at
> org.eclipse.jetty.io.SelectChannelEndPoint$2.run(SelectChannelEndPoint.java:93)
> at
> org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.executeProduceConsume(ExecuteProduceConsume.java:303)
> at
> org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.produceConsume(ExecuteProduceConsume.java:148)
> at
> org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.run(ExecuteProduceConsume.java:136)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
> at java.lang.Thread.run(Thread.java:748)
> Caused by: org.janusgraph.diskstorage.TemporaryBackendException: Could not
> successfully complete backend operation due to repeated temporary exceptions
> after PT1M40S
> at
> org.janusgraph.diskstorage.util.BackendOperation.executeDirect(BackendOperation.java:100)
> at
> org.janusgraph.diskstorage.util.BackendOperation.execute(BackendOperation.java:54)
> ... 103 more
> Caused by: org.janusgraph.diskstorage.TemporaryBackendException: Unable to
> complete query on Solr.
> at
> org.janusgraph.diskstorage.solr.Solr6Index.storageException(Solr6Index.java:1162)
> at
> org.janusgraph.diskstorage.solr.Solr6Index.mutate(Solr6Index.java:492)
> at
> org.janusgraph.diskstorage.indexing.IndexTransaction$1.call(IndexTransaction.java:155)
> at
> org.janusgraph.diskstorage.indexing.IndexTransaction$1.call(IndexTransaction.java:152)
> at
> org.janusgraph.diskstorage.util.BackendOperation.executeDirect(BackendOperation.java:68)
> ... 104 more
> Caused by: org.apache.solr.client.solrj.impl.CloudSolrClient$RouteException:
> Error from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow.
> at
> org.apache.solr.client.solrj.impl.CloudSolrClient.directUpdate(CloudSolrClient.java:539)
> at
> org.apache.solr.client.solrj.impl.CloudSolrClient.sendRequest(CloudSolrClient.java:993)
> at
> org.apache.solr.client.solrj.impl.CloudSolrClient.requestWithRetryOnStaleState(CloudSolrClient.java:862)
> at
> org.apache.solr.client.solrj.impl.CloudSolrClient.request(CloudSolrClient.java:793)
> at
> org.janusgraph.diskstorage.solr.Solr6Index.commitChanges(Solr6Index.java:611)
> at
> org.janusgraph.diskstorage.solr.Solr6Index.mutate(Solr6Index.java:487)
> ... 107 more
> Caused by:
> org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException: Error
> from server at
> http://solr-cluster-0.solr-cluster-headless.bigdata-storage:8983/solr/vertex_index_shard2_replica_n6:
> Attempted an atomic/partial update to a child doc without indicating the
> _root_ somehow.
> at
> org.apache.solr.client.solrj.impl.HttpSolrClient.executeMethod(HttpSolrClient.java:627)
> at
> org.apache.solr.client.solrj.impl.HttpSolrClient.request(HttpSolrClient.java:253)
> at
> org.apache.solr.client.solrj.impl.HttpSolrClient.request(HttpSolrClient.java:242)
> at
> org.apache.solr.client.solrj.impl.LBHttpSolrClient.doRequest(LBHttpSolrClient.java:483)
> at
> org.apache.solr.client.solrj.impl.LBHttpSolrClient.request(LBHttpSolrClient.java:413)
> at
> org.apache.solr.client.solrj.impl.CloudSolrClient.lambda$directUpdate$47(CloudSolrClient.java:516)
> at java.util.concurrent.FutureTask.run(FutureTask.java:266)
> at
> org.apache.solr.common.util.ExecutorUtil$MDCAwareThreadPoolExecutor.lambda$execute$128(ExecutorUtil.java:188)
> ... 3 more
> {code}
> I searched some informations in solr jira and found that in issue
> [Regression: Adding _root_ schema field to existing index causes atomic
> update failures|http://example.com]
> It seems like that in schema.xml atlas use *_root_* filed that not
> recommended.
> https://solr.apache.org/guide/8_9/indexing-nested-documents.html#schema-configuration
>
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