turtlebin created ATLAS-4616:
--------------------------------
Summary: Atlas 1.2.0 startup fails with ProtobufUtils class not
found when connecting to remote Hbase server
Key: ATLAS-4616
URL: https://issues.apache.org/jira/browse/ATLAS-4616
Project: Atlas
Issue Type: Bug
Components: atlas-core, hbase-integration
Affects Versions: 1.2.0
Environment: atlas1.2.0-rc3
hbase1.2.0+cdh5.16
Reporter: turtlebin
Atlas1.2.0 works fine when connecting to the localhost hbase server, but when
it changes to connect the remote hbase server, it will fail with ProtobufUtil
class not found when the server startup
2022-06-10 14:04:54,652 WARN - [main:] ~ Failed to obtain graph instance on
attempt 1 of 3 (AtlasGraphProvider:104)
java.lang.IllegalArgumentException: Could not instantiate implementation:
org.janusgraph.diskstorage.hbase.HBaseStoreManager
at
org.janusgraph.util.system.ConfigurationUtil.instantiate(ConfigurationUtil.java:64)
at
org.janusgraph.diskstorage.Backend.getImplementationClass(Backend.java:476)
at org.janusgraph.diskstorage.Backend.getStorageManager(Backend.java:408)
at
org.janusgraph.graphdb.configuration.GraphDatabaseConfiguration.<init>(GraphDatabaseConfiguration.java:1254)
at org.janusgraph.core.JanusGraphFactory.open(JanusGraphFactory.java:160)
at org.janusgraph.core.JanusGraphFactory.open(JanusGraphFactory.java:131)
at org.janusgraph.core.JanusGraphFactory.open(JanusGraphFactory.java:111)
at
org.apache.atlas.repository.graphdb.janus.AtlasJanusGraphDatabase.getGraphInstance(AtlasJanusGraphDatabase.java:142)
at
org.apache.atlas.repository.graphdb.janus.AtlasJanusGraphDatabase.getGraph(AtlasJanusGraphDatabase.java:240)
at
org.apache.atlas.repository.graph.AtlasGraphProvider.getGraphInstance(AtlasGraphProvider.java:52)
at
org.apache.atlas.repository.graph.AtlasGraphProvider.retry(AtlasGraphProvider.java:100)
at
org.apache.atlas.repository.graph.AtlasGraphProvider.get(AtlasGraphProvider.java:88)
at
org.apache.atlas.repository.graph.AtlasGraphProvider$$EnhancerBySpringCGLIB$$47657ab2.CGLIB$get$0(<generated>)
at
org.apache.atlas.repository.graph.AtlasGraphProvider$$EnhancerBySpringCGLIB$$47657ab2$$FastClassBySpringCGLIB$$edfa1576.invoke(<generated>)
at
org.springframework.cglib.proxy.MethodProxy.invokeSuper(MethodProxy.java:228)
at
org.springframework.context.annotation.ConfigurationClassEnhancer$BeanMethodInterceptor.intercept(ConfigurationClassEnhancer.java:358)
at
org.apache.atlas.repository.graph.AtlasGraphProvider$$EnhancerBySpringCGLIB$$47657ab2.get(<generated>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:162)
at
org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:588)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1181)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1075)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483)
at
org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:312)
at
org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
at
org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:308)
at
org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202)
at
org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:208)
at
org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1138)
at
org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1066)
at
org.springframework.beans.factory.support.ConstructorResolver.resolveAutowiredArgument(ConstructorResolver.java:835)
at
org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:741)
at
org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:189)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:1201)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1103)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483)
at
org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:312)
at
org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
at
org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:308)
at
org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202)
at
org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:208)
at
org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1138)
at
org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1066)
at
org.springframework.beans.factory.support.ConstructorResolver.resolveAutowiredArgument(ConstructorResolver.java:835)
at
org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:741)
at
org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:189)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:1201)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1103)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483)
at
org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:312)
at
org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
at
org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:308)
at
org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202)
at
org.springframework.aop.framework.autoproxy.BeanFactoryAdvisorRetrievalHelper.findAdvisorBeans(BeanFactoryAdvisorRetrievalHelper.java:92)
at
org.springframework.aop.framework.autoproxy.AbstractAdvisorAutoProxyCreator.findCandidateAdvisors(AbstractAdvisorAutoProxyCreator.java:102)
at
org.springframework.aop.aspectj.autoproxy.AspectJAwareAdvisorAutoProxyCreator.shouldSkip(AspectJAwareAdvisorAutoProxyCreator.java:103)
at
org.springframework.aop.framework.autoproxy.AbstractAutoProxyCreator.postProcessBeforeInstantiation(AbstractAutoProxyCreator.java:248)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyBeanPostProcessorsBeforeInstantiation(AbstractAutowireCapableBeanFactory.java:1045)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.resolveBeforeInstantiation(AbstractAutowireCapableBeanFactory.java:1019)
at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:473)
at
org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:312)
at
org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
at
org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:308)
at
org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
at
org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:761)
at
org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:867)
at
org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:543)
at
org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:443)
at
org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:325)
at
org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:107)
at
org.apache.atlas.web.setup.KerberosAwareListener.contextInitialized(KerberosAwareListener.java:31)
at
org.eclipse.jetty.server.handler.ContextHandler.callContextInitialized(ContextHandler.java:843)
at
org.eclipse.jetty.servlet.ServletContextHandler.callContextInitialized(ServletContextHandler.java:533)
at
org.eclipse.jetty.server.handler.ContextHandler.startContext(ContextHandler.java:816)
at
org.eclipse.jetty.servlet.ServletContextHandler.startContext(ServletContextHandler.java:345)
at
org.eclipse.jetty.webapp.WebAppContext.startWebapp(WebAppContext.java:1404)
at
org.eclipse.jetty.webapp.WebAppContext.startContext(WebAppContext.java:1366)
at
org.eclipse.jetty.server.handler.ContextHandler.doStart(ContextHandler.java:778)
at
org.eclipse.jetty.servlet.ServletContextHandler.doStart(ServletContextHandler.java:262)
at org.eclipse.jetty.webapp.WebAppContext.doStart(WebAppContext.java:520)
at
org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)
at
org.eclipse.jetty.util.component.ContainerLifeCycle.start(ContainerLifeCycle.java:131)
at org.eclipse.jetty.server.Server.start(Server.java:422)
at
org.eclipse.jetty.util.component.ContainerLifeCycle.doStart(ContainerLifeCycle.java:105)
at
org.eclipse.jetty.server.handler.AbstractHandler.doStart(AbstractHandler.java:61)
at org.eclipse.jetty.server.Server.doStart(Server.java:389)
at
org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)
at org.apache.atlas.web.service.EmbeddedServer.start(EmbeddedServer.java:98)
at org.apache.atlas.Atlas.main(Atlas.java:133)
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at
org.janusgraph.util.system.ConfigurationUtil.instantiate(ConfigurationUtil.java:58)
... 94 more
Caused by: org.janusgraph.diskstorage.PermanentBackendException: Permanent
failure in storage backend
at
org.janusgraph.diskstorage.hbase.HBaseStoreManager.<init>(HBaseStoreManager.java:336)
... 99 more
Caused by: java.io.IOException: java.lang.reflect.InvocationTargetException
at
org.apache.hadoop.hbase.client.ConnectionFactory.createConnection(ConnectionFactory.java:240)
at
org.apache.hadoop.hbase.client.ConnectionFactory.createConnection(ConnectionFactory.java:218)
at
org.apache.hadoop.hbase.client.ConnectionFactory.createConnection(ConnectionFactory.java:119)
at
org.janusgraph.diskstorage.hbase.HBaseCompat1_0.createConnection(HBaseCompat1_0.java:43)
at
org.janusgraph.diskstorage.hbase.HBaseStoreManager.<init>(HBaseStoreManager.java:334)
... 99 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at
org.apache.hadoop.hbase.client.ConnectionFactory.createConnection(ConnectionFactory.java:238)
... 103 more
Caused by: java.lang.NoClassDefFoundError: Could not initialize class
org.apache.hadoop.hbase.protobuf.ProtobufUtil
at org.apache.hadoop.hbase.ClusterId.parseFrom(ClusterId.java:64)
at
org.apache.hadoop.hbase.zookeeper.ZKClusterId.readClusterIdZNode(ZKClusterId.java:75)
at
org.apache.hadoop.hbase.client.ZooKeeperRegistry.getClusterId(ZooKeeperRegistry.java:105)
at
org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.retrieveClusterId(ConnectionManager.java:879)
at
org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.<init>(ConnectionManager.java:635)
... 108 more
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