Kengo Seki created BIGTOP-3540:
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Summary: Building Spark fails on CentOS 7
Key: BIGTOP-3540
URL: https://issues.apache.org/jira/browse/BIGTOP-3540
Project: Bigtop
Issue Type: Bug
Components: build, spark
Reporter: Kengo Seki
Building Spark is failing on CentOS 7 due to the lack of the knitr library.
https://ci.bigtop.apache.org/view/Packages/job/Bigtop-trunk-packages/701/COMPONENTS=spark,OS=centos-7/console
{code}
Error in loadVignetteBuilder(pkgdir, TRUE) :
* checking DESCRIPTION meta-information ... OK
RPM build errors:
vignette builder 'knitr' not found
Execution halted
error: Bad exit status from /var/tmp/rpm-tmp.PfHp35 (%build)
Bad exit status from /var/tmp/rpm-tmp.PfHp35 (%build)
> Task :spark-rpm FAILED
{code}
The Docker image in question was built without any errors:
https://ci.bigtop.apache.org/view/Docker/job/Docker-Toolchain-Trunk/OS=centos-7/167/console
{code}
Notice: /Stage[main]/Bigtop_toolchain::Renv/Package[pandoc]/ensure: created
Notice: /Stage[main]/Bigtop_toolchain::Renv/Package[R-devel]/ensure: created
Notice: /Stage[main]/Bigtop_toolchain::Renv/Package[R]/ensure: created
Notice: /Stage[main]/Bigtop_toolchain::Renv/Exec[install_r_packages]/returns:
executed successfully
Notice:
/Stage[main]/Bigtop_toolchain::Protobuf/File[/usr/src/0001-Backport-atomic-operations-with-support-of-arm64-and.patch]/ensure:
defined content as '{md5}1c62663f215f577fa07a22f5860eef53'
Notice: /Stage[main]/Bigtop_toolchain::Protobuf/Exec[download
protobuf]/returns: executed successfully
Notice: /Stage[main]/Bigtop_toolchain::Protobuf/Exec[install protobuf]/returns:
executed successfully
Notice: /Stage[last]/Bigtop_toolchain::Cleanup/Exec[clean packages]/returns:
executed successfully
Notice: /Stage[last]/Bigtop_toolchain::Cleanup/Exec[remove archives]/returns:
executed successfully
Notice: Finished catalog run in 716.17 seconds
...
BUILD SUCCESSFUL in 17s
1 actionable task: 1 executed
Removing intermediate container 7f0ae430745e
---> 5a2c5cd62ee4
Successfully built 5a2c5cd62ee4
Successfully tagged bigtop/slaves:trunk-centos-7
+ rm -f Dockerfile
BUILD SUCCESSFUL in 13m 18s
1 actionable task: 1 executed
+ docker push bigtop/slaves:trunk-centos-7
...
trunk-centos-7: digest:
sha256:e8ee97d9d799e0b206b0ffbdc1a846ca19d242d3b762ba7b50099ce6c062fd8e size:
1796
Finished: SUCCESS
{code}
But it actually doesn't have knitr for some reason.
{code}
$ docker pull bigtop/slaves:trunk-centos-7
trunk-centos-7: Pulling from bigtop/slaves
Digest: sha256:e8ee97d9d799e0b206b0ffbdc1a846ca19d242d3b762ba7b50099ce6c062fd8e
Status: Image is up to date for bigtop/slaves:trunk-centos-7
docker.io/bigtop/slaves:trunk-centos-7
$ docker run -it bigtop/slaves:trunk-centos-7 Rscript -e 'library(knitr)'
Error in library(knitr) : there is no package called 'knitr'
Execution halted
{code}
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