Hi all,
I am trying to implement new conditions for CRIS and I’ve come around a
peculiar problem. I’ve create a “BoostCondition” based on the same principle
than the WildCardCondition. Here’s it’s Ctor and query method:
public BoostCondition(VirtualProperty property, String value, Float boost) {
this.property = property;
this.value = value;
this.boost = boost;
}
public BoostCondition(UriRef uriRefProperty, String value, Float boost) {
this(new PropertyHolder(uriRefProperty,false), value,boost);
}
@Override
protected Query query() {
TermQuery termQuery = new TermQuery(new Term(property.getStringKey(),
value));
termQuery.setBoost(boost);
return termQuery;
}
Nothing fancy and here is how it is used:
conditions.add(new BoostCondition(RDF.type,
"<http://www.patexpert.org/ontologies/pmo.owl#PatentPublication>", new
Float(0.5)));
final List<NonLiteral> matchingNodes =
indexService.findResources(conditions, facetCollector);
node.addPropertyValue(ECS.contentsCount, matchingNodes.size());
All is well EXCEPT that in CRIS it will look for the field ‘RDF.type’ while
when indexed it is indexed as: “_STORED_”+RDF.type as per the following lucene
Query:
+J683e9b57eca321d4a268d4b24df62c9bfb7169b2:*sodium*
+http://www.w3.org/1999/02/22-rdf-syntax-ns#type:<http://www.patexpert.org/ontologies/pmo.owl#PatentPublication>^0.5
Attached is log with and without the custom condition
INDEXING
==========
13.01.2014 16:05:50.165 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer CRIS Reindex Thread[386]: cache full
or writes have ceased. Indexing...
13.01.2014 16:05:50.379 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
<http://fusepool.info/doc/pmc/3470790> considering 3 properties
([org.apache.clerezza.rdf.cris.PropertyHolder@b309d7c1,
org.apache.clerezza.rdf.cris.PropertyHolder@f5e5585a,
org.apache.clerezza.rdf.cris.JoinVirtualProperty@cf3ff15e])
13.01.2014 16:05:50.379 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@b309d7c1 with values 1
13.01.2014 16:05:50.379 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@b309d7c1(http://purl.org/dc/elements/1.1/subject)
with value http://fusepool.info/id/caa7fc7a-f024-47d8-925d-151eb8600b6b
13.01.2014 16:05:50.379 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@f5e5585a with values 2
13.01.2014 16:05:50.379 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@f5e5585a(http://www.w3.org/1999/02/22-rdf-syntax-ns#type)
with value http://fusepool.eu/ontologies/ecs#ContentItem
13.01.2014 16:05:50.379 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@f5e5585a(http://www.w3.org/1999/02/22-rdf-syntax-ns#type)
with value http://purl.org/ontology/bibo/Document
13.01.2014 16:05:50.380 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.JoinVirtualProperty@cf3ff15e with values 1
13.01.2014 16:05:50.380 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.JoinVirtualProperty@cf3ff15e(J683e9b57eca321d4a268d4b24df62c9bfb7169b2)
with value Two barriers for sodium in vascular endothelium? Vascular
endothelium plays a key role in blood pressure regulation. Recently, it has
been shown that a 5% increase of plasma sodium concentration (sodium excess)
stiffens endothelial cells by about 25%, leading to cellular dysfunction.
Surface measurements demonstrated that the endothelial glycocalyx (eGC), an
anionic biopolymer, deteriorates when sodium is elevated. In view of these
results, a two-barrier model for sodium exiting the circulation across the
endothelium is suggested. The first sodium barrier is the eGC which selectively
buffers sodium ions with its negatively charged prote-oglycans.The second
sodium barrier is the endothelial plasma membrane which contains sodium
channels. Sodium excess, in the presence of aldosterone, leads to eGC
break-down and, in parallel, to an up-regulation of plasma membrane sodium
channels. The following hypothesis is postulated: Sodium excess increases
vascular sodium permeability. Under such con-ditions (e.g. high-sodium diet),
day-by-day ingested sodium, instead of being readily buffered by the eGC and
then rapidly excreted by the kidneys, is distributed in the whole body before
being finally excreted. Gradually, the sodium overload damages the organism.
13.01.2014 16:05:50.388 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
<http://fusepool.info/doc/pmc/3581062> considering 3 properties
([org.apache.clerezza.rdf.cris.PropertyHolder@b309d7c1,
org.apache.clerezza.rdf.cris.PropertyHolder@f5e5585a,
org.apache.clerezza.rdf.cris.JoinVirtualProperty@cf3ff15e])
13.01.2014 16:05:50.388 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@b309d7c1 with values 2
13.01.2014 16:05:50.388 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@b309d7c1(http://purl.org/dc/elements/1.1/subject)
with value http://fusepool.info/id/4cfa649e-5eca-4349-bbb5-f782b87089d4
13.01.2014 16:05:50.388 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@b309d7c1(http://purl.org/dc/elements/1.1/subject)
with value http://fusepool.info/id/f421cc4a-619c-4189-a3ef-3c2025e50ac9
13.01.2014 16:05:50.388 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@f5e5585a with values 2
13.01.2014 16:05:50.388 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@f5e5585a(http://www.w3.org/1999/02/22-rdf-syntax-ns#type)
with value http://fusepool.eu/ontologies/ecs#ContentItem
13.01.2014 16:05:50.388 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.PropertyHolder@f5e5585a(http://www.w3.org/1999/02/22-rdf-syntax-ns#type)
with value http://purl.org/ontology/bibo/Document
13.01.2014 16:05:50.388 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.JoinVirtualProperty@cf3ff15e with values 1
13.01.2014 16:05:50.388 *INFO* [CRIS Reindex Thread[386]]
org.apache.clerezza.rdf.cris.GraphIndexer indexing
org.apache.clerezza.rdf.cris.JoinVirtualProperty@cf3ff15e(J683e9b57eca321d4a268d4b24df62c9bfb7169b2)
with value Diagnosis and treatment of mitochondrial myopathies Mitochondrial
disorders are a heterogeneous group of disorders resulting from primary
dysfunction of the respiratory chain. Muscle tissue is highly metabolically
active, and therefore myopathy is a common element of the clinical presentation
of these disorders, although this may be overshadowed by central neurological
features. This review is aimed at a general medical and neurologist readership
and provides a clinical approach to the recognition, investigation, and
treatment of mitochondrial myopathies. Emphasis is placed on practical
management considerations while including some recent updates in the field.
SEARCH WITHOUT CUSTOM CONDITION
===============================
13.01.2014 16:07:48.343 *INFO* [627421185@qtp-612005121-38]
org.apache.clerezza.rdf.cris.GraphIndexer luceneQuery:
+J683e9b57eca321d4a268d4b24df62c9bfb7169b2:*sodium*
13.01.2014 16:07:48.361 *INFO* [627421185@qtp-612005121-38]
org.apache.clerezza.rdf.cris.GraphIndexer
_STORED_http://purl.org/dc/elements/1.1/subject :
http://fusepool.info/id/caa7fc7a-f024-47d8-925d-151eb8600b6b
13.01.2014 16:07:48.361 *INFO* [627421185@qtp-612005121-38]
org.apache.clerezza.rdf.cris.GraphIndexer
_STORED_http://www.w3.org/1999/02/22-rdf-syntax-ns#type :
http://fusepool.eu/ontologies/ecs#ContentItem
13.01.2014 16:07:48.361 *INFO* [627421185@qtp-612005121-38]
org.apache.clerezza.rdf.cris.GraphIndexer
_STORED_http://www.w3.org/1999/02/22-rdf-syntax-ns#type :
http://purl.org/ontology/bibo/Document
13.01.2014 16:07:48.361 *INFO* [627421185@qtp-612005121-38]
org.apache.clerezza.rdf.cris.GraphIndexer
_STORED_J683e9b57eca321d4a268d4b24df62c9bfb7169b2 : Two barriers for sodium in
vascular endothelium? Vascular endothelium plays a key role in blood pressure
regulation. Recently, it has been shown that a 5% increase of plasma sodium
concentration (sodium excess) stiffens endothelial cells by about 25%, leading
to cellular dysfunction. Surface measurements demonstrated that the endothelial
glycocalyx (eGC), an anionic biopolymer, deteriorates when sodium is elevated.
In view of these results, a two-barrier model for sodium exiting the
circulation across the endothelium is suggested. The first sodium barrier is
the eGC which selectively buffers sodium ions with its negatively charged
prote-oglycans.The second sodium barrier is the endothelial plasma membrane
which contains sodium channels. Sodium excess, in the presence of aldosterone,
leads to eGC break-down and, in parallel, to an up-regulation of plasma
membrane sodium channels. The following hypothesis is postulated: Sodium excess
increases vascular sodium permeability. Under such con-ditions (e.g.
high-sodium diet), day-by-day ingested sodium, instead of being readily
buffered by the eGC and then rapidly excreted by the kidneys, is distributed in
the whole body before being finally excreted. Gradually, the sodium overload
damages the organism.
13.01.2014 16:07:48.361 *INFO* [627421185@qtp-612005121-38]
org.apache.clerezza.rdf.cris.GraphIndexer resource-uri :
http://fusepool.info/doc/pmc/3470790
13.01.2014 16:07:48.361 *INFO* [627421185@qtp-612005121-38]
org.apache.stanbol.entityhub.core.impl.SiteManagerImpl No Referenced Site
registered for Entity
http://fusepool.info/id/caa7fc7a-f024-47d8-925d-151eb8600b6b
13.01.2014 16:07:48.361 *INFO* [627421185@qtp-612005121-38]
org.apache.stanbol.entityhub.core.impl.SiteManagerImpl No Referenced Site
registered for Entity http://purl.org/ontology/bibo/Document
SEARCH WITH CUSTOM CONDITION
============================
13.01.2014 16:14:32.746 *INFO* [806435093@qtp-612005121-40]
org.apache.clerezza.rdf.cris.GraphIndexer luceneQuery:
+J683e9b57eca321d4a268d4b24df62c9bfb7169b2:*sodium*
+http://www.w3.org/1999/02/22-rdf-syntax-ns#type:<http://www.patexpert.org/ontologies/pmo.owl#PatentPublication>^0.5
