Ok. Opened it in gedit. Added the line to the end, but it won't let me save. Says it's read only
N On Jan 12, 2015 8:14 PM, "Michael Joyce" <jo...@apache.org> wrote: > You could use an editor such as nano (not sure if this would be > installed), emacs or vim (both of which would be potentially challenging > for you to use most likely). > > You should be able to run the following. > > echo "export PATH=\"/home/nic/climate/anaconda/bin/:$PATH\"" >> > ocw/bin/activate > > ">>" redirects input to the supplied output file. In this case the input > is the result of running > > echo "export PATH=\"/home/nic/climate/anaconda/bin/:$PATH\"" > > which is simply > export PATH="/home/nic/climate/anaconda/bin/:$PATH" > > And the output file is the activate script that we want to adjust. > > Hopefully that helps a bit. If it doesn't work let me know. > > > > > -- Joyce > > On Mon, Jan 12, 2015 at 8:09 PM, nic pederson <nicpeder...@gmail.com> > wrote: > >> I didn't add the line above because I'm not quite sure how. How do I edit >> the activate file? >> On Jan 12, 2015 8:03 PM, "Michael Joyce" <jo...@apache.org> wrote: >> >>> That is the virtualenv one. The anaconda one should be >>> /home/nic/climate/anaconda/bin/python. Note that if you added that line >>> above you will need to deactivate and reactivate the virtualenv for it to >>> take effect. >>> >>> If you want to test manually what I mentioned above you could try >>> >>> 0. Deactivate the virtualenv (just to be safe) >>> 1. initialize the virtualenv >>> 2. run `export PATH="/home/nic/climate/anaconda/bin/:$PATH"` >>> 3. run `which python` and see what you get >>> >>> >>> -- Joyce >>> >>> On Mon, Jan 12, 2015 at 7:55 PM, nic pederson <nicpeder...@gmail.com> >>> wrote: >>> >>>> Which python produces ~/climate/easy/easy-ocw/ocw/bin/python >>>> On Jan 12, 2015 7:42 PM, "Michael Joyce" <jo...@apache.org> wrote: >>>> >>>>> Ok not quite as confident now as I thought but try this. I think you >>>>> might be running into an annoying little bug and/or a gap in the >>>>> documentation here. Try adding this to the end of your ocw/bin/activate >>>>> file and see if that fixes this. >>>>> >>>>> >>>>> 1. export PATH=/home/nic/climate/anaconda/bin:$PATH >>>>> >>>>> >>>>> I think we're missing an export of a path in the install script when >>>>> you run a virtualenv and it's causing the wrong python to be called. You >>>>> can check by running "which python" and see if you get the anaconda one or >>>>> the virtualenv one. You want to be getting the anaconda one. Hopefully >>>>> that's the problem/solution. >>>>> >>>>> >>>>> -- Joyce >>>>> >>>>> On Mon, Jan 12, 2015 at 7:33 PM, Michael Joyce <jo...@apache.org> >>>>> wrote: >>>>> >>>>>> Ah ok I think I know what the problem is. One second to check and see. >>>>>> >>>>>> >>>>>> -- Joyce >>>>>> >>>>>> On Mon, Jan 12, 2015 at 7:25 PM, nic pederson <nicpeder...@gmail.com> >>>>>> wrote: >>>>>> >>>>>>> Here is my bash >>>>>>> >>>>>>> Pastebin.com/7ULyyng3 >>>>>>> On Jan 12, 2015 7:12 PM, "Michael Joyce" <jo...@apache.org> wrote: >>>>>>> >>>>>>>> Trying running source ocw/bin/activate from ~/climate/easy-ocw and >>>>>>>> see if that works >>>>>>>> >>>>>>>> >>>>>>>> -- Joyce >>>>>>>> >>>>>>>> On Mon, Jan 12, 2015 at 7:10 PM, nic pederson < >>>>>>>> nicpeder...@gmail.com> wrote: >>>>>>>> >>>>>>>>> "source activate" when in ~/climate/easy-ocw/ocw/bin >>>>>>>>> On Jan 12, 2015 7:05 PM, "Michael Joyce" <jo...@apache.org> wrote: >>>>>>>>> >>>>>>>>>> Hey Nic, >>>>>>>>>> >>>>>>>>>> What command are you using to start the environment? >>>>>>>>>> >>>>>>>>>> >>>>>>>>>> -- Joyce >>>>>>>>>> >>>>>>>>>> On Mon, Jan 12, 2015 at 7:00 PM, nicpeder...@gmail.com < >>>>>>>>>> nicpeder...@gmail.com> wrote: >>>>>>>>>> >>>>>>>>>>> Hi guys, >>>>>>>>>>> >>>>>>>>>>> I was still having trouble, so just did a fresh install of >>>>>>>>>>> ubuntu. Everything went fine until I tried to activate OCW. I get >>>>>>>>>>> an error >>>>>>>>>>> that says "error: no environment provided" >>>>>>>>>>> >>>>>>>>>>> Thanks again >>>>>>>>>>> >>>>>>>>>>> Nic >>>>>>>>>>> >>>>>>>>>>> Sent from my HTC phone. >>>>>>>>>>> >>>>>>>>>>> ----- Reply message ----- >>>>>>>>>>> From: "Michael Joyce" <jo...@apache.org> >>>>>>>>>>> To: "nic pederson" <nicpeder...@gmail.com> >>>>>>>>>>> Cc: "dev@climate.apache.org" <dev@climate.apache.org>, " >>>>>>>>>>> chris.a.mattm...@nasa.gov" <chris.a.mattm...@nasa.gov> >>>>>>>>>>> Subject: New Student - Caltech-JPL Summer School on Big Data >>>>>>>>>>> Analytics - Need Help Setting up OCW >>>>>>>>>>> Date: Mon, Jan 12, 2015 2:32 PM >>>>>>>>>>> >>>>>>>>>>> You should be able to run "rm -r >>>>>>>>>>> /home/nic/Learning/climate/anaconda" >>>>>>>>>>> (without quotes and make sure I actually got that directory correct >>>>>>>>>>> ;) >>>>>>>>>>> >>>>>>>>>>> Then you should be able to run the Anaconda script the same way >>>>>>>>>>> the install-ubuntu.sh script does. Namely: >>>>>>>>>>> bash Anaconda-1.9.2-Linux-x86_64.sh >>>>>>>>>>> >>>>>>>>>>> That .sh file should still be in the easy-ocw folder (assuming >>>>>>>>>>> you ran ./install-ubuntu.sh from /climate/easy-ocw/). When you go >>>>>>>>>>> through >>>>>>>>>>> the install just make sure you put the directory where you want it >>>>>>>>>>> instead >>>>>>>>>>> of the default. From above I think you'll want: >>>>>>>>>>> /home/nic/Learning/climate/ >>>>>>>>>>> >>>>>>>>>>> If you get stuck let us know! >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> -- Joyce >>>>>>>>>>> >>>>>>>>>>> On Mon, Jan 12, 2015 at 2:08 PM, nic pederson < >>>>>>>>>>> nicpeder...@gmail.com> wrote: >>>>>>>>>>> >>>>>>>>>>>> Thanks for looking. That's exactly what I did... What as the >>>>>>>>>>>> best way to wipe/reinstall? Im fairly new to Linux and command >>>>>>>>>>>> line in >>>>>>>>>>>> general. >>>>>>>>>>>> >>>>>>>>>>>> Nic >>>>>>>>>>>> On Jan 12, 2015 1:51 PM, "Michael Joyce" <jo...@apache.org> >>>>>>>>>>>> wrote: >>>>>>>>>>>> >>>>>>>>>>>>> Ok after looking around a bit and checking your RC my guess is >>>>>>>>>>>>> that you did something along the lines of: >>>>>>>>>>>>> >>>>>>>>>>>>> Ran install-ubuntu.sh >>>>>>>>>>>>> Decided to move where Anaconda was installed by cp-ing (or >>>>>>>>>>>>> something) it somewhere else >>>>>>>>>>>>> ... >>>>>>>>>>>>> Ended up where we're at >>>>>>>>>>>>> >>>>>>>>>>>>> If that is the case then I think your problem is that you >>>>>>>>>>>>> can't move Anaconda around after the initial install. If you want >>>>>>>>>>>>> it in a >>>>>>>>>>>>> different place you'll need to do that at install-time. Check >>>>>>>>>>>>> this convo >>>>>>>>>>>>> [1] for a bit more info. Basically just reinstall Anaconda where >>>>>>>>>>>>> you want >>>>>>>>>>>>> it and blow out the old install just to be safe. The install >>>>>>>>>>>>> script forces >>>>>>>>>>>>> you to install it in the default location. Patches are more than >>>>>>>>>>>>> welcome to >>>>>>>>>>>>> fix this ;) >>>>>>>>>>>>> >>>>>>>>>>>>> If that's not what you did then what did you do. Maybe a bit >>>>>>>>>>>>> more info will get us pointed in the right direction =) >>>>>>>>>>>>> >>>>>>>>>>>>> You can also remove the following line from your RC. This >>>>>>>>>>>>> looks like an input error when running install-ubuntu.sh >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> 1. export >>>>>>>>>>>>> >>>>>>>>>>>>> PYTHONPATH=~Learning/climate/easy-owc/install-ubuntu.sh:~Learning/climate/easy-owc/ >>>>>>>>>>>>> install-ubuntu.sh/ocw >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> [1] >>>>>>>>>>>>> https://groups.google.com/a/continuum.io/forum/#!msg/anaconda/LcaXE25qElM/VKWYghrjb98J >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> -- Joyce >>>>>>>>>>>>> >>>>>>>>>>>>> On Mon, Jan 12, 2015 at 1:23 PM, nicpeder...@gmail.com < >>>>>>>>>>>>> nicpeder...@gmail.com> wrote: >>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> .bashrc >>>>>>>>>>>>>> pastebin.com/P4Ux1XJm >>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> "conda info" >>>>>>>>>>>>>> >>>>>>>>>>>>>> bash: /home/nic/Learning/climate/anaconda/bin/conda: >>>>>>>>>>>>>> /home/nic/anaconda/bin/python: bad interpreter: no such file or >>>>>>>>>>>>>> directory >>>>>>>>>>>>>> >>>>>>>>>>>>>> Sent from my HTC phone. >>>>>>>>>>>>>> >>>>>>>>>>>>>> ----- Reply message ----- >>>>>>>>>>>>>> From: "Michael Joyce" <jo...@apache.org> >>>>>>>>>>>>>> To: "nic pederson" <nicpeder...@gmail.com> >>>>>>>>>>>>>> Cc: "dev@climate.apache.org" <dev@climate.apache.org>, " >>>>>>>>>>>>>> chris.a.mattm...@nasa.gov" <chris.a.mattm...@nasa.gov> >>>>>>>>>>>>>> Subject: New Student - Caltech-JPL Summer School on Big Data >>>>>>>>>>>>>> Analytics - Need Help Setting up OCW >>>>>>>>>>>>>> Date: Mon, Jan 12, 2015 12:58 PM >>>>>>>>>>>>>> >>>>>>>>>>>>>> Mkay. Can you please post your entire bashrc (pastebin link >>>>>>>>>>>>>> would probably be best) and the output of "conda info"? It >>>>>>>>>>>>>> doesn't seem to >>>>>>>>>>>>>> be cooperating with regards to where it should look for conda >>>>>>>>>>>>>> packages. I'm >>>>>>>>>>>>>> thinking there's some residual config from a previous install or >>>>>>>>>>>>>> I'm >>>>>>>>>>>>>> forgetting something really obvious. Worst case we might need to >>>>>>>>>>>>>> blow out >>>>>>>>>>>>>> the entire Anaconda install and redo it (FUN!). Hopefully it's >>>>>>>>>>>>>> just >>>>>>>>>>>>>> something stupid in a config somewhere we can update. >>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> -- Joyce >>>>>>>>>>>>>> >>>>>>>>>>>>>> On Mon, Jan 12, 2015 at 12:51 PM, nic pederson < >>>>>>>>>>>>>> nicpeder...@gmail.com> wrote: >>>>>>>>>>>>>> >>>>>>>>>>>>>>> /home/nic/Learning/climate/anaconda/bin/conda >>>>>>>>>>>>>>> On Jan 12, 2015 12:47 PM, "Michael Joyce" <jo...@apache.org> >>>>>>>>>>>>>>> wrote: >>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> Strange. When you run "which conda" what do you see? >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> -- Joyce >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> On Mon, Jan 12, 2015 at 12:40 PM, nic pederson < >>>>>>>>>>>>>>>> nicpeder...@gmail.com> wrote: >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>> That did it! Except now I cannot activate OWC. When I >>>>>>>>>>>>>>>>> activate, I get a line like: >>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>> bash: (correct path)/climate/anaconda/bin/conda: >>>>>>>>>>>>>>>>> /home/nic/anaconda/bin/python: bad interpreter: no such file >>>>>>>>>>>>>>>>> or directory >>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>> Thanks again for your help. >>>>>>>>>>>>>>>>> Nic >>>>>>>>>>>>>>>>> On Jan 12, 2015 12:08 PM, "Michael Joyce" < >>>>>>>>>>>>>>>>> jo...@apache.org> wrote: >>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> No problem Nic, >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> You should have a line in your bashrc similar to the >>>>>>>>>>>>>>>>>> following. >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> export PATH=~/Anaconda/bin:$PATH >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> If you replace the assumed path with the location where >>>>>>>>>>>>>>>>>> Anaconda actually is you should be golden. If that doesn't >>>>>>>>>>>>>>>>>> fix if for you >>>>>>>>>>>>>>>>>> though let us know. >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> -- Joyce >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> On Mon, Jan 12, 2015 at 12:00 PM, nic pederson < >>>>>>>>>>>>>>>>>> nicpeder...@gmail.com> wrote: >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> Thanks guys! That sounds about right. The missing module >>>>>>>>>>>>>>>>>>> is numpy when owc is activated. (It's filenames when it's >>>>>>>>>>>>>>>>>>> deactivated)... >>>>>>>>>>>>>>>>>>> Also, I feel like I may have made a bit of a mess of the >>>>>>>>>>>>>>>>>>> file structure in >>>>>>>>>>>>>>>>>>> trying to move/reinstall Anaconda a couple times. >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> Thanks for all your help. >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> Nic >>>>>>>>>>>>>>>>>>> On Jan 12, 2015 11:23 AM, "Michael Joyce" < >>>>>>>>>>>>>>>>>>> jo...@apache.org> wrote: >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>> Hi Nic (and Chris), >>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>> I'm guessing from your question that you are installing >>>>>>>>>>>>>>>>>>>> onto Ubuntu with the last release of OCW (0.4). You should >>>>>>>>>>>>>>>>>>>> be fine on >>>>>>>>>>>>>>>>>>>> 14.10, the old scripts were only tested on 12.04 so we >>>>>>>>>>>>>>>>>>>> list that >>>>>>>>>>>>>>>>>>>> explicitly. Of course there is still a possibility that >>>>>>>>>>>>>>>>>>>> you might run into >>>>>>>>>>>>>>>>>>>> some problems. If you're pulling off the latest master >>>>>>>>>>>>>>>>>>>> then the Ubuntu >>>>>>>>>>>>>>>>>>>> script is tested on 12.04 and 14.04. What modules are >>>>>>>>>>>>>>>>>>>> failing for you? If >>>>>>>>>>>>>>>>>>>> it's something like numpy/scipy then you probably have an >>>>>>>>>>>>>>>>>>>> issue with the >>>>>>>>>>>>>>>>>>>> location of the Anaconda bin and your path. This could be >>>>>>>>>>>>>>>>>>>> a result of >>>>>>>>>>>>>>>>>>>> Anaconda being installed in a different spot than expected >>>>>>>>>>>>>>>>>>>> or it could be a >>>>>>>>>>>>>>>>>>>> bug in the install scripts. If you're having problems with >>>>>>>>>>>>>>>>>>>> some OCW modules >>>>>>>>>>>>>>>>>>>> not importing then it probably a problem with the >>>>>>>>>>>>>>>>>>>> PYTHONPATH not being set >>>>>>>>>>>>>>>>>>>> as expected. Let us know what problems you're seeing and >>>>>>>>>>>>>>>>>>>> I'm sure we can >>>>>>>>>>>>>>>>>>>> get it sorted quickly. >>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>> -- Joyce >>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>> On Mon, Jan 12, 2015 at 8:10 AM, Mattmann, Chris A >>>>>>>>>>>>>>>>>>>> (3980) <chris.a.mattm...@jpl.nasa.gov> wrote: >>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> Hi Nic, thanks for your question and am forwarding to >>>>>>>>>>>>>>>>>>>>> the Apache >>>>>>>>>>>>>>>>>>>>> OCW list for some more help! >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> Cheers, >>>>>>>>>>>>>>>>>>>>> Chris >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ >>>>>>>>>>>>>>>>>>>>> Chris Mattmann, Ph.D. >>>>>>>>>>>>>>>>>>>>> Chief Architect >>>>>>>>>>>>>>>>>>>>> Instrument Software and Science Data Systems Section >>>>>>>>>>>>>>>>>>>>> (398) >>>>>>>>>>>>>>>>>>>>> NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA >>>>>>>>>>>>>>>>>>>>> Office: 168-519, Mailstop: 168-527 >>>>>>>>>>>>>>>>>>>>> Email: chris.a.mattm...@nasa.gov >>>>>>>>>>>>>>>>>>>>> WWW: http://sunset.usc.edu/~mattmann/ >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ >>>>>>>>>>>>>>>>>>>>> Adjunct Associate Professor, Computer Science >>>>>>>>>>>>>>>>>>>>> Department >>>>>>>>>>>>>>>>>>>>> University of Southern California, Los Angeles, CA >>>>>>>>>>>>>>>>>>>>> 90089 USA >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> -----Original Message----- >>>>>>>>>>>>>>>>>>>>> From: Nic <nicpeder...@gmail.com> >>>>>>>>>>>>>>>>>>>>> Date: Monday, January 12, 2015 at 8:08 AM >>>>>>>>>>>>>>>>>>>>> To: Chris Mattmann <chris.a.mattm...@nasa.gov> >>>>>>>>>>>>>>>>>>>>> Subject: New Student - Caltech-JPL Summer School on >>>>>>>>>>>>>>>>>>>>> Big Data Analytics - >>>>>>>>>>>>>>>>>>>>> Need Help Setting up OCW >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> >Hi Chris! >>>>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>>>> >I'm really excited for this class, but I'm a little >>>>>>>>>>>>>>>>>>>>> hung up on Day 1 >>>>>>>>>>>>>>>>>>>>> >installations. Long story short, I've setup PyLint >>>>>>>>>>>>>>>>>>>>> and OCW, but OCW >>>>>>>>>>>>>>>>>>>>> >seems to be unable to find some modules. Could this >>>>>>>>>>>>>>>>>>>>> be because I >>>>>>>>>>>>>>>>>>>>> >installed files (i suspect anaconda) in the wrong >>>>>>>>>>>>>>>>>>>>> folders? >>>>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>>>> >I'm running Ubuntu 14.10 (Lenovo IdeaPad). I noticed >>>>>>>>>>>>>>>>>>>>> that OCW install >>>>>>>>>>>>>>>>>>>>> >instructions say that I should be running 12.04. I >>>>>>>>>>>>>>>>>>>>> have 14.10 installed. >>>>>>>>>>>>>>>>>>>>> >I'm trying to wipe and restart Ubuntu with 12.04 now, >>>>>>>>>>>>>>>>>>>>> but am having >>>>>>>>>>>>>>>>>>>>> >trouble getting it to boot. Can I run 14.10 with OCW? >>>>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>>>> >I've checked the discussion boards and have done a >>>>>>>>>>>>>>>>>>>>> bit of research >>>>>>>>>>>>>>>>>>>>> >already, but not much fruit. >>>>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>>>> >Thanks so much and I look forward to hearing from you, >>>>>>>>>>>>>>>>>>>>> >Nic Pederson >>>>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>>>> >541.953.1520 >>>>>>>>>>>>>>>>>>>>> >@nicpederson >>>>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>> >>>>>>>> >>>>>> >>>>> >>> >
