James, Thanks for getting back.
I checked out from SVN. I have not tried other UMLS pipelines I downloaded the ZIP, but did not extract/merge into workspace since I saw a bunch of "-res" folders in the workspace, I was not sure if this step was needed anymore. Thanks for looking into this. Best Regards Kannan Thiagarajan On Fri, Apr 12, 2013 at 11:42 AM, Masanz, James J. <[email protected]>wrote: > I too see that error in my workspace that I checked out from SVN when I > try to use that pipeline. > > Some questions so I can describe corrective steps appropriately > - did you check out from SVN or did you download and install from an > install artifact? > - have you been able to run any other *UMLSProcessor pipelines? > - if you downloaded the external resources described in the "Download > cTAKES 3.0 Dictionaries and models" step [1], where did you extract them to? > > > [1] http://s.apache.org/ctakes3.0resourcesStep > > > -- James > > > > -----Original Message----- > > From: [email protected] [mailto: > dev- > > [email protected]] On Behalf Of Kannan > > Thiagarajan > > Sent: Friday, April 12, 2013 9:57 AM > > To: [email protected] > > Subject: FileNotFoundException: > > org/apache/ctakes/dictionary/lookup/rxnorm_index > > > > Hello Team, > > > > I was trying out the CVD on the DrugNER > > (DrugAggregatePlaintextUMLSProcessor.xml) pipeline and I got a > > FileNotFoundException on the rxnorm_index. > > > > First I was suspecting a Workspace setup issue on my part but then I > > noticed the following JIRA > > > > https://issues.apache.org/jira/browse/CTAKES-156 > > > > I'm guessing a fix maybe available in a future release. My question is, > is > > there a workaround or a quick fix I can perform in my workspace. > > > > Appreciate any pointers to get around this issue. > > > > Thanks & Best Regards > > Kannan Thiagarajan > -- Best Regards Kannan Thiagarajan
