Which version of cTAKES are you running (have you checked it out from trunk or something else)?
There should be log messages stating in which directory (full path) cTAKES has found your copy of the Orange Book. Please compare the contents of that directory on your machine with https://svn.apache.org/repos/asf/ctakes/trunk/ctakes-dictionary-lookup-res/src/main/resources/org/apache/ctakes/dictionary/lookup/OrangeBook/ or with http://svn.apache.org/viewvc/ctakes/trunk/ctakes-dictionary-lookup-res/src/main/resources/org/apache/ctakes/dictionary/lookup/OrangeBook/ Regards, James Masanz > -----Original Message----- > From: [email protected] [mailto:dev- > [email protected]] On Behalf Of Arohi > Kumar > Sent: Tuesday, September 03, 2013 2:25 AM > To: [email protected] > Subject: Problem with using OrangeBook index > > Hello everyone, > > I am trying to run ClinicalPipelineWithUMLS.java (main file in the > ctakes-clinical-pipeline) using Eclipse. I keep running into > > java.io.EOFException: read past EOF: RAMInputStream(name=segments) > > when I am opening the index OrangeBook. It occurs at the line > > iv_logger.info("Loading Lucene Index into memory: " + indexDir); > FSDirectory fsd = FSDirectory.open(indexDir); Directory d = new > RAMDirectory(fsd, IOContext.DEFAULT); iv_indexReader = > IndexReader.open(d); [THIS LINE] > > Could someone shed light on where I am going wrong. Thank you. > > ~Arohi
