Hi Dima, I run RelationExtractorPipelineSingleCas.java and i got degree_of(severe pain/3, severe/2) degree_of(pain/3, severe/2) location_of(pain/3, wrists/6)
but when i run UIMA_CVD--relation-extractor.launch - or UIMA_CPE--relation-extractor.launch on the hurd coded text "He still is not able to work because of severe pain involving his wrists." there is no annotation of type: org.apache.ctakes.typesystem.type.relation.LocationOf org.apache.ctakes.typesystem.type.relation.DegreeOf I need to identify the relations by their annotation type so i can iterate on them Thanks Samir ________________________________ From: Dmitriy Dligach <[email protected]> To: [email protected]; samir chabou <[email protected]>; "[email protected]" <[email protected]> Sent: Monday, September 23, 2013 4:38:35 PM Subject: Re: examples of relation extractor annotations Samir, Could you please try to run ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorPipelineSingleCas.java and see if it finds any relations in the hard-coded sample sentence. In that sentence "He still is not able to work because of severe pain involving his wrists." you should see the following relations: degree_of(severe pain/3, severe/2) degree_of(pain/3, severe/2) location_of(pain/3, wrists/6) which will be printed to the console. The numbers next to each argument are the UMLS semantic types (e.g. 6 = anatomical site). Dima On 09/21/2013 11:00 AM, samir chabou wrote: > Hi, > I tried to get examples of relation extractor annotations using > RelationExtractorAggregate.xml. I tried the RelationExtractorAggregate on > many input medical text but there was no annotation for any kind of relation. > I even tried the bellow text used in RelationExtractorAnnotatorsTest but > again no relation is annotated. Do you have idea or am i missing some thing ? > "He had a slight fracture in the proximal right fibula.", > "He had a slight fracture in the proximal right fibula .", > "PRP VBD DT JJ NN IN DT JJ JJ NN ."); > > > Thanks > Samir > -- Dmitriy Dligach, PhD Research Fellow Children's Hospital Informatics Program Boston Children's Hospital and Harvard Medical School (617) 919-3596
