Nick, I am not sure how complete it is, but I believe the UMLS has the semantic type of
Bacterium <https://uts.nlm.nih.gov//semanticnetwork.html#Bacterium;0;0;2014AA> [T007] It's most likely not included in the default cTAKES dictionaries though... Thanks, Pei On Mon, Jun 30, 2014 at 10:31 AM, Nick Nikandish < [email protected]> wrote: > Hi there, > > > > I was wondering if Ctakes has any Bacterium Dictionary? I need to extract > information for bacteria like “Enterococcus Faecium”, “Pseudomonas > Aeruginosa “ , etc and I was wondering if I can do it by using Ctakes > annotators? > > > > Thanks, > > > > *Nick Nikandish* > > *Product Development Software Engineer* > > Clinical Research Informatics > > > > *Emerging Health* > > *Montefiore Information Technology* > > 6 Executive Blvd. Suite 290, Yonkers, NY 10701 > > 914-457-6792 Office > > [email protected] > > www.emerginghealthit.com > > www.montefiore.org > > > > [image: logo-montefiore-it] > > >
