Nick, It is fairly easy to extend an annotator (either a java class or groovy script) to extract just the items for your specific use case. Check out the HelloWorldAnnotator and Pipeline from ctakes-examples project. I can write an example that just outputs the CUI if you like, but I have a hunch that you may also want other attributes such as (negation?, etc.)?
On Tue, Jul 8, 2014 at 2:42 PM, Nick Nikandish < [email protected]> wrote: > Hi there, > > I was wondering if there is any way to retrieve CUIs for the tokens of a > free text in CTakes without changing the codebase? I am able to retrieve > CUIs for only medications in a text. > > > > Thanks, > Nick > > >
