Hello, i'm using CTAKES for class project. I'm using CPE to process clinical text notes. I ran the software with -Xmx10g command. I have 16g in my machine.
my problem is: running the CPE takes a long long time. I'm processing 175 clinical notes with a total of 40MB for all the notes. CPE has been running close to 4 hours now, and it's only been able to process 104 out of 175. I'm using the "test1.xml" CPE descriptor and "AggregatePlaintextUMLSProcessor.xml" analysis engine(clinical-text-pipeline). it seems like java is only using 2 core out of the 16 I have. RAM usage hover between 5-8gb. is there anyway i can make the software run a bit faster?
