[+dev] Yu, Check out the type system: http://svn.apache.org/repos/asf/ctakes/trunk/ctakes-type-system/src/main/resources/org/apache/ctakes/typesystem/types/TypeSystem.xml
Note: I believe what you really want is *org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation and not *org.apache.ctakes.assertion.medfacts.types.Concept (anything in the assertion.medfacts* is really an internal construct not intended to be used outside of the assertion module) *IdentifiedAnnotation.*ontologyConceptArr[] contains the array of *org.apache.ctakes.typesystem.type.refsem.OntologyConcept/UMLSConcept* On Wed, Apr 8, 2015 at 3:53 PM, Liang, Yu <yu.li...@nyumc.org> wrote: > Dear Pei, > > Thank you for your previous help, I think I figure out how to run Ctakes > by command line using “AggregateCdaUMLSProcessor.xml” Analysis Engine. > But I am wondering is there any tutorial like how to interpret the xml > results specifically the part that containing “ConceptText=" > > For example: > > <org.apache.ctakes.assertion.medfacts.types.Concept _indexed="2" _id= > "34678" _ref_sofa="15" begin="202" end="215" conceptType="PROBLEM" > conceptText="Date of Birth" externalId="0" originalEntityExternalId="13854 > ”/> > > what does “_id” , “_ref_sofa”, “originalEntityExternalId”, etc. mean? > > Appreciate! > > > > Yu Liang > > CHIBI > > > > > >
