This also should be covered at our upcoming meetup in boston. On Tue, Sep 22, 2015 at 9:22 AM, Christopher Baechle <[email protected]> wrote:
> I've noticed that the ctakes-distribution doesn't seem to package the > resources. Manually downloading the resources from the website and > following the directions for coping into the resources directory > solved the issues for me. > > > https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.2+User+Install+Guide > > On Tue, Sep 22, 2015 at 7:28 AM, Geise, Brandon D. > <[email protected]> wrote: > > As a follow-up I've followed the distribution packaging strategy to > package my application and I've gotten past the error below, but now I'm > running into the error below: > > Caused by: org.apache.uima.resource.ResourceInitializationException: > Could not access the resource data at > resources\org\apache\ctakes\dictionary\lookup\fast\cakesHsql.xml. > > > > I've double checked all my paths and tried changing from relative to > absolute but still no luck? Has anyone run into this before and have a > suggestion on where to look? > > > > Thanks, > > Brandon > > > > > > From: Geise, Brandon D. > > Sent: Monday, September 21, 2015 9:59 AM > > To: '[email protected]' <[email protected]> > > Subject: Packaging Ctakes Application > > > > Hi All, > > > > I've created a test application using Ctakes and now would like to > package into jar. What I've tried is creating a single jar with all > resources in the JAR and it starts loading the models as expected for the > TokenizerAnnotatorPTB (default from cTakes) but close to the end of the > loading the models I get a URI is not hierarchical error. > > > > Loading configuration. > > Loading feature templates. > > Loading lexica. > > Loading model: > > ................................ > > Loading model: > > ............................. > > URI is not hierarchical > > java.lang.IllegalArgumentException: URI is not hierarchical > > > > > > If I run the same from Eclipse it looks like > > Loading configuration. > > Loading feature templates. > > Loading lexica. > > Loading model: > > ................................ > > Loading model: > > ............................. > > 21 Sep 2015 09:47:19 INFO AbstractJCasTermAnnotator - Using dictionary > lookup window type: org.apache.ctakes.typesystem.type.textspan.Sentence > > > > Can someone offer some suggestions on the best way to package a maven > application that uses cTakes? Based on another thread I have even tried to > extract the resources folder and specify in the classpath but I'm still > receiving the same error. > > > > Thanks, > > Brandon > > > > > > IMPORTANT WARNING: The information in this message (and the documents > attached to it, if any) is confidential and may be legally privileged. It > is intended solely for the addressee. Access to this message by anyone else > is unauthorized. If you are not the intended recipient, any disclosure, > copying, distribution or any action taken, or omitted to be taken, in > reliance on it is prohibited and may be unlawful. If you have received this > message in error, please delete all electronic copies of this message (and > the documents attached to it, if any), destroy any hard copies you may have > created and notify me immediately by replying to this email. Thank you. > > > > Geisinger Health System utilizes an encryption process to safeguard > Protected Health Information and other confidential data contained in > external e-mail messages. If email is encrypted, the recipient will receive > an e-mail instructing them to sign on to the Geisinger Health System Secure > E-mail Message Center to retrieve the encrypted e-mail. > -- jay vyas
