Hi Matthew, One of the updates that happened with ctakes 4.0 was the long-awaited update to use the current version of hypersql (hsqldb) used by components such as the dictionary lookup modules. That update made all of the older dictionary databases obsolete as their format does not match that used by the current hsqldb.
Your best option is probably to create an updated '17 icd dictionary of your own. Have a look at the wiki introduction to the dictionary creator gui: https://cwiki.apache.org/confluence/display/CTAKES/Dictionary+Creator+GUI Sean -----Original Message----- From: Matthew Vita [mailto:[email protected]] Sent: Sunday, August 27, 2017 3:29 PM To: [email protected] Subject: ICD10 Dictionary Issue [EXTERNAL] Hi cTAKES Maintainers, My name is Matthew Vita, a healthcare software developer and one of the OpenEMR project administrators (this is a popular open source EHR mainly used outside of the US). I am interested in integrating cTAKES with the EMR using Docker and a friendly web frontend. Fortunately, Dr. Timothy Miller has provided an excellent Docker pipeline solution that I have been using and enhancing. However, I'm having an issue with ICD10 dictionary support. Introducing ctakesicd2015 simply has no effect. When observing the SNOMED/RXNORM dictionary, the structure is as follows: - sno_rx_16ab.xml - sno_rx_16ab - sno_rx_16ab.properties - sno_rx_16ab.script However, when one pulls down the https://urldefense.proofpoint.com/v2/url?u=https-3A__sourceforge.net_p_ctakesresources_code_HEAD_tree_trunk_ctakes-2Dresources-2Dsnomed-2Drword-2Dhsqldb-2D2011ab_src_main_resources_org_apache_ctakes_dictionary_lookup_fast_ctakesicd2015&d=DwIBaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=bmYyxtv1U77r3grgB76TXATo01ayCe_Gu1kOvL5VvD8&s=XWhnGpcbuQvkPzwgSYg9uuRlzBBm_K_GwEprLsJ0QJk&e= , the structure is: - ctakesicd2015.script - ctakesicd2015.properties cTAKES does not pick up these files. I wonder if it's because the ctakesicd2015.xml manifest is missing. Can anyone point me to a proper download of this file? I very much appreciate the hard work behind this project and look forward to hearing back. Thanks, Matthew Vita www.matthewvita.com
